Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1813 |
Symbol | |
ID | 8019469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1929900 |
End bp | 1931093 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830597 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_002981767 |
Protein GI | 241663407 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAACC TGCCCGACGC CCACGGCCAT TTTGGCCCCT ACGGCGGCAC CTTCGTTGCG GAAACGCTGT CCCACGCGCT GGATGAATTG CGCGACGCCT ATGCGCGCTA CCAGCACGAT CCCGAGTTCA TCAAGGAATA CGAATACGAG CTGAAGCACT TCGTCGGCCG CCCGTCGCCC ATCTATCACG CGCGCCGCCT GACCGAACAC TGCGGCGGCG CACAGATTTA CCTGAAGCGC GAAGACCTGA ACCACACCGG CGCGCACAAG GTGAACAACG TGATCGGCCA GGCGCTGCTG GCGCGCCGCA TGGGCAAGCC GCGCGTGATT GCCGAAACCG GCGCCGGCCA GCATGGTGTC GCCACCGCCA CGATTGCTGC GCGCTACGGC ATGGAATGCG TCGTCTACAT GGGCAGCGAA GACGTGCGCC GCCAGGCCGC GAACGTCTAC CGCATGAAGC TGCTGGGCGC GACGGTGGTG CCAGTGGAAT CGGGATCGCG CACGCTTAAG GACGCGCTGA ACGAAGCGAT GCGCGACTGG GTGACCAACG TGGCCGACAC CTTCTACATC ATCGGCACGG TGGCGGGCCC GCACCCGTAT CCGATGATGG TGCGCGACTT CCAGGCCGTG ATCGGCGAGG AATGCAAGGT GCAGATGCCC GAGATGACCG GACGCCAGCC GGACGCCGTG ATCGCCTGCG TGGGCGGCGG CTCCAACGCC ATGGGCATCT TCTATCCGTA CATCGATCAT GCCGACGTCA AGCTGATCGG CGTGGAAGCA GCGGGCGAGG GCATCGAGAC CGGCCGCCAC GCCGCGTCGC TCATGGGTGG CTCACCGGGC GTGCTGCACG GTAACCGCAC CTATCTGCTG CAGGATGAGG ATGGCCAGAT CATCGAGACG CATTCGATTT CGGCGGGGCT GGACTATCCG GGCGTCGGTC CGGAACACGC CTGGTTGAAG GATGTGCAGC GCGCGGAATA CGTCGGCATT ACCGACAAGG AAGCGCTGCA ATCCTTCCAT GACCTGTGCC GCATGGAGGG CATCATCCCG GCGCTGGAAT CGAGCCATGC GCTGGCGTAT GCGTGCAAGC TGGCGCCGAC GCTGCCCAAA GACAAGATCC TGCTCGTGAA CCTGTCGGGC CGCGGCGACA AGGACATGCA TACCGTCGCA GAAGTCTCCG GCATCCAACT CTAA
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Protein sequence | MYNLPDAHGH FGPYGGTFVA ETLSHALDEL RDAYARYQHD PEFIKEYEYE LKHFVGRPSP IYHARRLTEH CGGAQIYLKR EDLNHTGAHK VNNVIGQALL ARRMGKPRVI AETGAGQHGV ATATIAARYG MECVVYMGSE DVRRQAANVY RMKLLGATVV PVESGSRTLK DALNEAMRDW VTNVADTFYI IGTVAGPHPY PMMVRDFQAV IGEECKVQMP EMTGRQPDAV IACVGGGSNA MGIFYPYIDH ADVKLIGVEA AGEGIETGRH AASLMGGSPG VLHGNRTYLL QDEDGQIIET HSISAGLDYP GVGPEHAWLK DVQRAEYVGI TDKEALQSFH DLCRMEGIIP ALESSHALAY ACKLAPTLPK DKILLVNLSG RGDKDMHTVA EVSGIQL
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