Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1792 |
Symbol | |
ID | 8019448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1914611 |
End bp | 1915267 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830576 |
Product | TonB family protein |
Protein accession | YP_002981746 |
Protein GI | 241663386 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.433494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCACC CTCGTACTCT CAAGATTCTC GTCGTCGTGC TGTTGATGCA CGCGGGCGTG CTGATGCTGA TTCAGCTTGG CCTGATCGCA CCGCGCCCGA CTGTCGAAGA ACCGCTGGAA ATCCAGGCGC ACATCATTCC GGCCGCGCCT GAGCCGATCA AGCAGCCGGA GCCTCCCAAG CAGCAGCCGG TCAAGCAAGA GGCGCCCAAG CCTGTCAACA TCGTCAGGCC GGTCGCGCAA CCCAAGCCCA TGCCGATGCC GACGCCCATG CTCCCGCCAT CGGACAACGC CCCCGTGGTG CCCGCCGCAC CGCCCGCACC GCCGGCACCG GCCCCTGAAC AAGCGCCCGC GCCGGCCCCC GTTTCGTCCG GTCCGATCAG CGTCGGCATC AACGACATCC AGTGCAGCGA GCCGCCGCTC GTCTATCCCA GCATGTCGCA GAAAATGGGC GAGGAAGGCC GCGCCATGGT CAAGATTTCC ATCGGCACGG CCGGTGAGGT CACCAATGTT GCGGTCACGT CGTCGTCCGG CTCGCCTCGC CTGGACCGCG CTGCCGCCGA TGCCGCGCGC GCCATCAAGT GCAGCCCGTA CAAGCAGAAC GGCCGCGCCG TGCCCGTGGT GGCCAGCAAG CCGTTCGTCT TCAAGCTCGA CAACTAA
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Protein sequence | MIHPRTLKIL VVVLLMHAGV LMLIQLGLIA PRPTVEEPLE IQAHIIPAAP EPIKQPEPPK QQPVKQEAPK PVNIVRPVAQ PKPMPMPTPM LPPSDNAPVV PAAPPAPPAP APEQAPAPAP VSSGPISVGI NDIQCSEPPL VYPSMSQKMG EEGRAMVKIS IGTAGEVTNV AVTSSSGSPR LDRAAADAAR AIKCSPYKQN GRAVPVVASK PFVFKLDN
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