Gene Rpic12D_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1756 
Symbol 
ID8019411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1870321 
End bp1871223 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID644830539 
ProductAspartyl/Asparaginyl beta-hydroxylase 
Protein accessionYP_002981710 
Protein GI241663350 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.644759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCAAGT GGATTATCGT GGCCCTCTAT CTGGGCTCCA TTCTGTACGT GCACTTTCGC 
GGCAAGGTGC GCCTGAAGTT CTGGCGCCAG ATGTTCGACC ACTCGGCCGT CGTGGCGCCG
ATCAACTGCT TCATGTACGC GTTTTCGGGC GTGCCTCAAA CGCCGTATGT GCCGGTTGAG
CGCTTTCCGG ACCTGGAAAA ACTGCAGGCC GCATGGCCGC AAATTCGCGA CGAAGGCCTG
GCGCTCATCA ACCTGCGCAA GATCAAGGCC GCCGAGAAAA ACGACGATGC CGGCTTCAAC
TCGTTCTTCA AGAATGGCTG GAAGCGTTTT TATCTGAAGT GGTATGAGGC GCATCACCCC
TCTGCCGAAC AGCTCTGCCC GCAGACCGTC GCGCTCCTGC GCGATCTGCC CAGCGTGAAG
GCGGCGATGT TTGCCGAGCT GCCGCCGGGT GGCAAGCTGA ACCCGCACCG CGATCCGTTT
GCCGGTTCGC TGCGCTACCA CCTGGGCCTC TCTACGCCCA ACGACGACCG CTGCTTCATT
GAGGTCGACG GCCAGCGCCA CAGCTGGCGC GACGGCCAGG GCGTCGTCTT TGACGAAACC
TATCTGCACT GGGCCGAAAA CGCCTCCGAC AAGGACCGCC TGATCCTCTT CTGCGATATC
GAACGCCCGA TGAAATTCGG CTGGGCGCAG CGCATCAATA AATGGCTGGG CCGCAAGGTC
ATGACTGCCG CCAGCTCGCC CAACGACGAC GGCGACCAGA CCGGCGGCAT CAACAAGCTG
TTTCGTTATG TATGGGTGAT GGGCCAGTAC CGCCGCCGCT TCAAGGCCTG GAACCGCAAG
GCATACTACG TAGTGAAGTT CGGTCTGATC ATTGGCGTGG CGGCGTTGAT CATCTGGATC
TGA
 
Protein sequence
MIKWIIVALY LGSILYVHFR GKVRLKFWRQ MFDHSAVVAP INCFMYAFSG VPQTPYVPVE 
RFPDLEKLQA AWPQIRDEGL ALINLRKIKA AEKNDDAGFN SFFKNGWKRF YLKWYEAHHP
SAEQLCPQTV ALLRDLPSVK AAMFAELPPG GKLNPHRDPF AGSLRYHLGL STPNDDRCFI
EVDGQRHSWR DGQGVVFDET YLHWAENASD KDRLILFCDI ERPMKFGWAQ RINKWLGRKV
MTAASSPNDD GDQTGGINKL FRYVWVMGQY RRRFKAWNRK AYYVVKFGLI IGVAALIIWI