Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1711 |
Symbol | |
ID | 8019365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1819008 |
End bp | 1821218 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644830494 |
Product | polyphosphate kinase |
Protein accession | YP_002981666 |
Protein GI | 241663306 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0855] Polyphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00451534 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.547143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT GGCCGGATCG TCATCCGTCA GAACACAACA TGTCGACATT GCCCGCGGGC GATCTGCTCA ATCGCGAACT GGGCATCCTG GAATTCAACG CCCGTGTGCT CGCCCAGGCC GCTGACCCGG GTGTGCCGCT GATGGAGCGG CTGAAATTCA TCTGCATCGT GTCGAGCAAT CTCGATGAGT TCTTTGAAAT CCGCATTGCC GGATTGAAGG AGCAGATGCG CGACAACCCT TCGTCGGTCA CGCCCGACGG GCTGTCGGTG CAGCAGGCAT TTGGCGTGGT CTCGGAGCGG GTGCGGCAGC TGGTCGCGCA ACAGTATGCC ATGTTGCAGG AGGAGATCCT GCCCTTGCTG GAGAAGGAAG GCGTCTTCTT CCACATGACC ACCAATTGGA ATGAAGCCCA GCGCGCCTGG TGTCGCAGTT TCTTCCAGCG CGAGCTGGTA CCCATTTTGA CGCCAATGGC TCTTGACCCT GCGCACCCGT TCCCACGCGT GCTCAACAAG AGCCTGAACT TCATCATCGA GCTGTCGGGC AAGGACGCAT TCGGCCGTGA GGCAGAGCTA GCCATCGTGC AGGCCCCGCG CGCCCTGCCC CGGCTGGTGC AGATGCCGCC GGAACTGTCG GGCTACCCGT ATGGGTTCGT GCTGCTGTCG TCGTTCATGC AGGGCTTTGT GCATGAGCTG TTCCCGCAGA TCGACGTACA TGGCTGCTAC CAATTCCGAG TGACGCGCAA CTCCGACCTG TTTGTATCGG AAGATGAAAT CACGGACTTG CGCGAAGCGC TGCAGGGTGA ATTGTCTACG CGCCACTTCG GCGACGCAGT ACGCCTGGAA ATCGCACACG ACACGTCGCC CGCGCTGGTG GTGCGACTGC TGCAGGAGTT CGGCCTGACC GACGCGGACT GCTACCGCGT TAAAGGGCCT GTGAACCTGG TGCGCCTGCT GCAGGTGCCC GACATGGTCG ACAAACCGGT GCTGAAATAC CCGCCGCACG TGCCGGCAAC GGTCAGGCAG GTGGCCAACA GTTCCAACGT GTTTGACGCC ATCCGCCAGG GCGACATCCT GCTGCACCAT CCATACGAAA GCTTCACGCC AGTGCTGGAG CTGCTGCAGC AGGCAGCGCG CGACCCCGAC GTGGTCGCAA TCAAGCAGAC CGTCTACCGC ACCGGCAACG AATCCACGGT GATGGAAGCG CTCATCAAAG CTGCGCACAA CGGTAAGGAG GTGACCGTCG TCGTCGAACT GCTCGCGCGC TTTGACGAAG AGACGAACAT CAACTGGGCG GACCAGCTTG AATCGGCCGG CGCTCATGTC GTGTATGGCG TGGTCGGTCA CAAGTGCCAC GCGAAGATGC TGCTGGTGGT GCGCCGCGAA GTATCCGGCA AGGGCAAGGC CGTCAGGCTG CGCCGCTACG CGCATCTGGG CACGGGCAAC TACCACCCCA AGACCGCCCG CCTCTACACC GACTTCGGCC TGATGACGGC GAACGAGCAG ATCTGCGAAG ACGTGCATCA CGTGTTCCAG TTGCTCACGG GCACGGGCGC ACAGGTCAAG CTGCATCATC TGTGGCACTC GCCATTCACG ATGCACGACA ACCTGATCGA GCACATTCGA GCTGAAGCAC GCGCCGCTCG AGCAGGCAAA CGTGCGCGCA TCATCGGCAA GATGAATGCG CTGCTGGAGC CGGCCATCAT CGACGAGCTG TACAAGGCGT CGCGGGCGGG CGTGAAGGTC GACTTGATTG TGCGCGGTGT CTGCGCCCTC AAGCCGGGCG TGCCGGGGCT GTCGGAGAAC ATCAGCGTTC GCTCCATCGT CGGGCGTTTC CTGGAGCATC ACCGCGTCTA CTACTTCCAT GCCGGTGGCG AGGAGGTCGT CTACCTCTCC AGCGCCGACT GGATGGACCG CAACCTGTTC CGTCGCGTGG AAGTGGCCTT CCCCGTGCTT GATCGCAAGC TCAAGGCGCG CGTCATCAAG GAAAGCCTCC AGGTGCATCT GCGCGACAAT GCGTCGGCGT GGGTCATGCA GCAGGATGGC CGTTACGTGC AGCGCCAGAC GCGGGGCAAG CATGTGCGCG TCAGCCAGTT GGAACTGCTG AACCACTTCT CGCCGCAGGC TGCTGCTGCG GCGGAAACGG CGGCCGCAGT GGCAGCGGCA ACGGCCGCGG AACCGACGGT TCGCGCGCCG GTGGAGATCT CCGCAGGCTG A
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Protein sequence | MKKWPDRHPS EHNMSTLPAG DLLNRELGIL EFNARVLAQA ADPGVPLMER LKFICIVSSN LDEFFEIRIA GLKEQMRDNP SSVTPDGLSV QQAFGVVSER VRQLVAQQYA MLQEEILPLL EKEGVFFHMT TNWNEAQRAW CRSFFQRELV PILTPMALDP AHPFPRVLNK SLNFIIELSG KDAFGREAEL AIVQAPRALP RLVQMPPELS GYPYGFVLLS SFMQGFVHEL FPQIDVHGCY QFRVTRNSDL FVSEDEITDL REALQGELST RHFGDAVRLE IAHDTSPALV VRLLQEFGLT DADCYRVKGP VNLVRLLQVP DMVDKPVLKY PPHVPATVRQ VANSSNVFDA IRQGDILLHH PYESFTPVLE LLQQAARDPD VVAIKQTVYR TGNESTVMEA LIKAAHNGKE VTVVVELLAR FDEETNINWA DQLESAGAHV VYGVVGHKCH AKMLLVVRRE VSGKGKAVRL RRYAHLGTGN YHPKTARLYT DFGLMTANEQ ICEDVHHVFQ LLTGTGAQVK LHHLWHSPFT MHDNLIEHIR AEARAARAGK RARIIGKMNA LLEPAIIDEL YKASRAGVKV DLIVRGVCAL KPGVPGLSEN ISVRSIVGRF LEHHRVYYFH AGGEEVVYLS SADWMDRNLF RRVEVAFPVL DRKLKARVIK ESLQVHLRDN ASAWVMQQDG RYVQRQTRGK HVRVSQLELL NHFSPQAAAA AETAAAVAAA TAAEPTVRAP VEISAG
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