Gene Rpic12D_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1708 
Symbol 
ID8019362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1815805 
End bp1816296 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content64% 
IMG OID644830491 
Productphosphohistidine phosphatase, SixA 
Protein accessionYP_002981663 
Protein GI241663303 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID[TIGR00249] phosphohistidine phosphatase SixA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.113004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.92031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCA TCTTCACCAT GAACCTCATC CTGTGGCGCC ACGCAGAAGC CGAAGACTTG 
GCCGCATCCT TGCGCATCCA GCGCAACACC GATCTGCAGC GAGAACTCAC CAAGCGCGGC
CACAAGCAGG CCGAGAAAAT GGCCGATTGG CTGCGCCCCC GCTTGCCTGA AGACACGCTC
GTACTCGCGA GCCCCGCGGT CCGCACACAG CAGACCGCAC GCGCCCTCAC CGAACATTTC
CAGACGCTGC CCGCGCTCGC GCCTGGCGCA GATGTGAGCG CGATCCTCGA TGCATTGGAC
TGGCCGTCGA ATACGAACCT GCTACTAGTC GGCCATCAGC CGTGGCTCGG GCGCCTTGCC
AGCCTGCTCA TCGCGGGCAC GGAAATGGAC TGGAGCGTAA AGAAAGCCGG CGTGTGGTGG
CTCTGCCGCC GCATGCGCGA AGACGAAGCA CAGACCGTGC TCCGCGCGGT GGTGAACCCC
GATCTCGCGT GA
 
Protein sequence
MLRIFTMNLI LWRHAEAEDL AASLRIQRNT DLQRELTKRG HKQAEKMADW LRPRLPEDTL 
VLASPAVRTQ QTARALTEHF QTLPALAPGA DVSAILDALD WPSNTNLLLV GHQPWLGRLA
SLLIAGTEMD WSVKKAGVWW LCRRMREDEA QTVLRAVVNP DLA