Gene Rpic12D_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1688 
Symbol 
ID8019341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1797647 
End bp1799224 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content64% 
IMG OID644830470 
Producthypothetical protein 
Protein accessionYP_002981643 
Protein GI241663283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.3838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCGA ACCGACGTCA ACGCACTCGC CTGGCCGCCA GCCTTCTGGC TGCCGCCAGC 
CTGTTACTCA CCGCCTGCCA ATCTGGAATG TCGATGTCCG CCAACAACAC CCGCAAGCCC
GTGGCCTGGC CGCGCATGTC AGCCGCCACC ACGCAAGCCG ATGCCAACGC CCCCGCCGCC
GTGCTGCTGG GCGTGCAGTG GATCAACCCG CTGATGCGGC GCGGCTACCC CACCCAATGG
AACCTGCTGT GGGCACAGGG CCTGGCCCAG CCCAATGCGG ATGACCTGCA GGCGAGCAAG
TTCAAGCTGG GGGATGCAGT GGGGCAGTTG ACGCTCGGTC TGGAGCGCAA GAAGCGGATG
GAGGACTATC CGCATCTCAA ACGTGATGAG TTCTTGACGG CTTTCAGCGA ATTGCTCACC
GCCCCGCTGA ACACCTTCAC CTACTACCCC TCCGTCCAGA GCTACTTCTA CTCGATTGCC
CCGGGCAGCG ACCGGCCCGA CTACATGGAT ACCGTCGTGT TCGCGGGCAT GCCGCACCAG
TGGATCGGCA CACCCACGTA CCTCAAGAGC TATGCGCCCG GCGACTGGGG CAGCCTGGAT
ACGCTGCTCA AAGAGCAGGC TGCCATGGGC CTGCCCGCGC CCAGTTACCT GGCCTACGAC
GCCGCGCATG CCAAGGAGCG CATGCACGAC TACTGGGGCA AGCTGCACAA GGACCCCGAA
ACGGGTAAAA CCGTGCGCGG CCTGCGTGTT CTTGAGGGCA TGATCGTCGG CGAAACCACC
CTCACACTGG ATGCGGCGTG GCGGCTGGTC TTCGACAAGG TTGCCTATGC TTCCTACGCC
AAAAGCATGG AAGACAATCC CACCGGCAAG CTCCCCCAAG TGGTGCTCAA GGCTGGTGAT
GAAACCGTGG GCTTCTACGA TCTGCAAGAA GCGCTGGCGT TCCTGGCCGA GCACCCCAAC
AAGCTTGTGT GGGTGTGGAA CCTGGATGCC CCCAACTACC CCATGGGCCA GCAGACCAAC
GAAAACACCG CCATCCTGAT CCTGGGCCAC CCCAGCGCCA ACTGGGGTTA CACGCCCTTG
GCCTCCATCT ACACACCGCA GCACCATGAA GGTGGCATCG ACGCCCGTGC ACCCAACCCC
GGCGGCGCCT GGAGCCCGAT GATGCAGGCG CTCCAGGCGC AAGCCCCAGA CAACCATCCA
GTCGAGCGTC TGTACCACGA CGCACACAAG CACAGCGCCA ACATCAACAC CCTCATGCGG
CCCGTGCACG CTGCCGTGCA CCAGCAATGG CCGGACCTGG ATCAAGTTGG CAACTTCTAT
AGCGTGTCCC AAGTGATGGA AGGCCCGGCG CGCGCGGCCA GCTTTGCGGT CAACGCCGCG
TTTGCCGCGG CCTATGCCAA CCAGAGCGGC AAGAGCGCCG TCGTCACCAG CGTGGTCGAT
GCCAAAGATA GCTGGGCCGT GCTGATTGGC CCGCCGCCGG GCTGGCAGCC CTCGCCACCG
GTCAGGCGGT GGGATCGCGC ACGGGGCGAG GGGCGGGCCT ATTGGCCGTG GTTTGGGGAG
CCTGTTGAGA AAAAATAA
 
Protein sequence
MHPNRRQRTR LAASLLAAAS LLLTACQSGM SMSANNTRKP VAWPRMSAAT TQADANAPAA 
VLLGVQWINP LMRRGYPTQW NLLWAQGLAQ PNADDLQASK FKLGDAVGQL TLGLERKKRM
EDYPHLKRDE FLTAFSELLT APLNTFTYYP SVQSYFYSIA PGSDRPDYMD TVVFAGMPHQ
WIGTPTYLKS YAPGDWGSLD TLLKEQAAMG LPAPSYLAYD AAHAKERMHD YWGKLHKDPE
TGKTVRGLRV LEGMIVGETT LTLDAAWRLV FDKVAYASYA KSMEDNPTGK LPQVVLKAGD
ETVGFYDLQE ALAFLAEHPN KLVWVWNLDA PNYPMGQQTN ENTAILILGH PSANWGYTPL
ASIYTPQHHE GGIDARAPNP GGAWSPMMQA LQAQAPDNHP VERLYHDAHK HSANINTLMR
PVHAAVHQQW PDLDQVGNFY SVSQVMEGPA RAASFAVNAA FAAAYANQSG KSAVVTSVVD
AKDSWAVLIG PPPGWQPSPP VRRWDRARGE GRAYWPWFGE PVEKK