Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1655 |
Symbol | |
ID | 8019307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1758144 |
End bp | 1758929 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644830436 |
Product | short chain dehydrogenase |
Protein accession | YP_002981610 |
Protein GI | 241663250 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0365832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0290451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTGT CGATCAATCT GGAAGGCAAA GTCGCGCTGA TCACCGGCGC ATCGAGCGGC CTGGGCGCAC GTTTTGCCCA CACGCTGGCC GCCGCGGGTG CAAAGGTCGT CCTGGCCTCC CGCCGTGTAG AGCGCCTGAA GGAGCTGCGC GCCGACATCG AATCCAAGGG CGGCAGCGCC CACGTCGTCC GCCTGGACGT GACGGATCCC GACAGCATCC GCGCCGCTAT CGCGCACGCT GAAACCGAGG CCGGCACCAT CGACATCCTC GTCAACAACT CGGGAGTCTC GACCACGCAG CGCATGGTGG ACGTCACTCC GGACGACTTC GATTTCGTGT TCGATACCAA CACCCGTGGC GCATTCTTCG TAGCGCAGGA AACGGCCAAG CGCATGATTG CGCGCGCAAA GGGTGCGGAG AAAAACGGTT CACCGCTGCC GCAATCGCGC ATCGTCAACA TTGCATCTGT GGCGGGGCTG AAGGTGCTGT CGCAGATTGG CGTGTATTGC ATGAGCAAAG CCGCCGTGGT GCACATGACC AAGGCCATGG CGCTGGAGTG GGGCCGTTAC GGCATCAATA CGAACGCGAT CTGCCCGGGC TACATCGACA CCGAAATCAA TCATCACCAC TGGGAAACCG AGCCGGGTCA AAAGCTTGTG CAGATGTTGC CGCGCAAGCG CGTTGGCAAG CCGGAAGACC TCGATGGGCT GATTCTGCTG CTGGCGTCGG ATCAGTCCGA CTTCATCAAC GGTGCCGTCA TCAACGCCGA CGACGGCATG GTGTAA
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Protein sequence | MGLSINLEGK VALITGASSG LGARFAHTLA AAGAKVVLAS RRVERLKELR ADIESKGGSA HVVRLDVTDP DSIRAAIAHA ETEAGTIDIL VNNSGVSTTQ RMVDVTPDDF DFVFDTNTRG AFFVAQETAK RMIARAKGAE KNGSPLPQSR IVNIASVAGL KVLSQIGVYC MSKAAVVHMT KAMALEWGRY GINTNAICPG YIDTEINHHH WETEPGQKLV QMLPRKRVGK PEDLDGLILL LASDQSDFIN GAVINADDGM V
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