Gene Rpic12D_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1643 
SymbolpheS 
ID8019294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1746735 
End bp1747769 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content62% 
IMG OID644830424 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_002981599 
Protein GI241663239 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0263565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.215775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGG ATCTGGATCA AGTCGTCGTC GATGCCCAAA ACGCGTTTGC CGCTGTGCAG 
GACAACGCCT CGTTGGAAAA CGAGAAGGCC CGCTTTCTCG GTAAGTCCGG CGTGCTGACC
GACTTGCTCA AAGGCTTGGG TAAGCTCGAT CCGGAAACCC GCAAGTCCGA AGGCGCGCGC
ATCAACCAAG CCAAGAGCCG GGTAGAAGAA GCGCTCAACG CCCGCCGCCA GGCGCTGGCC
GATGCGCTGA TGAATGCCCG CCTGGCCGCA GAGGCGATCG ACGTGACGCT GCCCGGGCGC
GACGTGGCAG AGGGCAGTCT GCACCCTGTG ATGAACACCT GGGAGCGCGT CGCCAAGATC
TTCGGTTCGA TCGGCTTCGA TGTCGCTGAC GGCCCCGAAA TCGAGTCCGA CTGGATGAAC
TTCACGGCGC TGAACAACCC GGACAACCAT CCGGCACGCT CGATGCAGGA TACGTTCTAC
ATCGACGGTC GCGACAGCGA AGACAAGCTC TTGCTCCTGC GCACGCACAC GAGCCCGATG
CAGGTGCGCT ATGCCCGCAT GCACGTGGAG AAGTACAAGC ACCTCGACCG CATCCCGCCG
ATCAAGGTTA TCGCCCCGGG CCGCACGTAT CGTGTCGACA GCGATGCCAC GCACTCGCCG
ATGTTCCACC AGGTCGAAGG CCTCTGGATT GCAGACAACA TCAGCTTTGC CGACCTGAAG
GGCGTCTATA CCGATTTCCT GCGCAATTTC TTCGAGCGCG ACGACATCCA GGTGCGTTTC
CGCCCGTCCT ATTTCCCGTT CACCGAACCG TCGGCAGAGA TCGATATGGC GTTCGGCAAC
GGTAAATGGC TGGAGATTTC CGGCTCCGGT CAGGTGCACC CCACCGTAGT GCGCAACATG
GGCCTCGACC CCGAGCGCTA CATCGGCTTT GCGTTCGGCT CCGGTCTGGA GCGCCTGACG
ATGCTGCGCT ATGGCATCAG CGACCTGCGC CTGTTCTTCG AGGGCGATGT GCGTTTCCTG
CGCCAGTTCG CGTAA
 
Protein sequence
MSLDLDQVVV DAQNAFAAVQ DNASLENEKA RFLGKSGVLT DLLKGLGKLD PETRKSEGAR 
INQAKSRVEE ALNARRQALA DALMNARLAA EAIDVTLPGR DVAEGSLHPV MNTWERVAKI
FGSIGFDVAD GPEIESDWMN FTALNNPDNH PARSMQDTFY IDGRDSEDKL LLLRTHTSPM
QVRYARMHVE KYKHLDRIPP IKVIAPGRTY RVDSDATHSP MFHQVEGLWI ADNISFADLK
GVYTDFLRNF FERDDIQVRF RPSYFPFTEP SAEIDMAFGN GKWLEISGSG QVHPTVVRNM
GLDPERYIGF AFGSGLERLT MLRYGISDLR LFFEGDVRFL RQFA