Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1642 |
Symbol | pheT |
ID | 8019293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1744242 |
End bp | 1746671 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830423 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_002981598 |
Protein GI | 241663238 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.39134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTTC CGGAATCCTG GCTTCGCAGT TTCGTCAATC CGTCGATCAC CACGGATGAG CTTTCCCATC GCCTGACGAT GGCTGGCCTC GAGGTGGAAG AGGTCGACCC CGTCGCGCCG CCGTTCTCGC AGATCGTCGT CGGCCATGTG GTCGAGGTGA ACAAGCACCC GGACGCCGAT CGCCTCAACG TGTGCAAGGT CGATGCGGGC ACGGGCGAAT TGCTGCAGAT CGTCTGCGGT GCGCCGAACG TGTCGGTAGG CATCAAGGTG CCGTGCGCGC TGGTCGGCGC GGACCTGCCG CCGGGCGAAG ACGGCAAGCC GTTCAAGATC AAGATCGGCA AGCTGCGTGG CGTGGAGAGC TACGGCATGC TGTGTTCGGC GCGCGAGCTG AAGCTGTCGG AAGACCACGG CGGGCTGCTG ATCCTGCCGG AAGACACGCC GGTGGGCGAA GACATCCGCA AGGTGCTCGA TCTGGACGAC CAGATCTTCG TCATCAAGCT CACACCCAAC AAGGCCGACT GCCTGTCGAT CCATGGCGTG GCGCGTGAAG TGTCCGCGCT GACGGGCGCC CCCATTACCG TGCCGTCGAT GGCACCCGTG GCGGTAACGC TGGCCGACAA GTTGCCGGTC AAGGTGGAAG CACCGGACCT GTGTGGTCGC TTCTCGGGCC GCATCATCCG CGGTGTGAAC GCGCACGCGA AGACGCCGGC CTGGATGGTG TCGCGCATCG AGCGCGCGGG CATGCGCAGC GTGTCGGCGC TGGTGGATAT CTCGAACTAC GTGATGCTGG AGCTGGGCCG TCCGTCGCAC GTGTTCGACC TGGACAAGAT CCACGGCGGC CTGACGGTGC GCTGGGGCAA GGCTGGCGAA CAGATGAAGC TGCTCAACGG CGACACCATC ACGGTCGACG AAAAGGTCGG CGTGATCTCG GACGAGCAGG CCATCGAAAG CCTCGCCGGC ATCATGGGCG GCGACAAGAC GGCCGTCACG CTCGATACAC AGAACATCTA TGTTGAAGCC GCATTCTGGT GGCCGGAAGC CATCCAGGGC CGTGCGCGCC GCTACAACTT CTCGACCGAT GCGGGCCACC GCTTCGAGCG CGGCGTTGAT TACGCGACCA CCGTTGAACA CATCGAACGC ATCAGCGCGC TGATCCTCGA AATCTGTGGC GGCCAGGCTG GACCGATCGA TGACCAGATC GTCAATCTGC CCAAGCGCGA GCCTGTGCGC ATGCGTGTCG CACGTGCCGC GCGCGTCCTG GGTATTCCGC TGTCGCACGA CGTTGTGGAG GACGTGTTCA AGCGCCTCGG CCTCACGTTC AGCGTGGACG GCGATGTGTT CATCGTCGAG CCGCCATCGT ATCGCTTCGA CCTTGAAATC GAAGAAGACC TGATTGAAGA AGTCGCCCGC ATCTACGGTT TCGAGCGGAT TCCCGCCAAG CCCCCCGTGG CTGAGAACGC GATGCGCCCG ACTGACGAGG CGCACCGCAC GATGCACGAC GTGCGTCATG CCGTTGCTGC ACGTGATTAC CACGAGGTCG TCAACTTCGC CTTTGTCGAG ACCGAATGGG AAGCCGACTT TGCCGGCAAC ACCAACCCGA TTCCGCTGCT GAATCCGATT GCCAGCCAGT ACTCGGTGAT GCGCAGCACG CTCATCGGCG GCTTGCTGGA CAAGGTGCGC TACAACCTGA ACCGCAAGGC TTCGCGGGTA CGCATGTTCG AGGTGGGTCG TGTGTTCCAC CGCGATGCGA CTGTCGCCGA TGGTGGTCTG TCGATCGCCG GGTACGCACA GCCGATGATG GCCGGTGGCA TTGCATATGG TCCGGCCAAG GAAGAGCAGT GGGGCGTGCA GACACGCCCT GTTGATTTCT TCGATGTAAA GGGTGACGTC GAATCGCTGC TGTGGCCGTT GCAGGCGCGT TTCGAGCGCG CGGAGCACCC CGCGCTCCAC CCGGGCCGCT CCGCACGCGT GGTGCTGAAT GGCCGTGCCA TCGGCTGGAT CGGTGAACTG CATCCGCGTT GGCTGCAAAA ATACGACCTG CCGACTGCGC CGGTGGTGTG GGAGCTGGAG CTTGATGCCA TCACCGCTGT CGGTCTGCCG AAGTATCGCG AAGTGCCCCG TGTGCCAGCA GTGACGCGCG ACATTGCGCT CGTCGTACGT CAGGATGTGG CGGTGCAAGA CCTTGTCGAT ATCTTCGAAA AGACGGCTGT TGGCACGCCT TGGGAACGCT ATCTGCAAGG CGTTGTGCTG TTCGATGAAT TCCGTCCGAA GGCCGCCACG GCTGCCATTG GGGCGCAGGA GAAAAGCCTT GCCTTCAGAA TTACGTTGCA AGATACTGAC AGCACCCTTC AGGACGACAT TGTCGAGGCC GCCACACAGC AACTGATTCG AGCGGCCGGC GATGCATTCG GCGCGCGCCT GCGTGCCTGA
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Protein sequence | MQFPESWLRS FVNPSITTDE LSHRLTMAGL EVEEVDPVAP PFSQIVVGHV VEVNKHPDAD RLNVCKVDAG TGELLQIVCG APNVSVGIKV PCALVGADLP PGEDGKPFKI KIGKLRGVES YGMLCSAREL KLSEDHGGLL ILPEDTPVGE DIRKVLDLDD QIFVIKLTPN KADCLSIHGV AREVSALTGA PITVPSMAPV AVTLADKLPV KVEAPDLCGR FSGRIIRGVN AHAKTPAWMV SRIERAGMRS VSALVDISNY VMLELGRPSH VFDLDKIHGG LTVRWGKAGE QMKLLNGDTI TVDEKVGVIS DEQAIESLAG IMGGDKTAVT LDTQNIYVEA AFWWPEAIQG RARRYNFSTD AGHRFERGVD YATTVEHIER ISALILEICG GQAGPIDDQI VNLPKREPVR MRVARAARVL GIPLSHDVVE DVFKRLGLTF SVDGDVFIVE PPSYRFDLEI EEDLIEEVAR IYGFERIPAK PPVAENAMRP TDEAHRTMHD VRHAVAARDY HEVVNFAFVE TEWEADFAGN TNPIPLLNPI ASQYSVMRST LIGGLLDKVR YNLNRKASRV RMFEVGRVFH RDATVADGGL SIAGYAQPMM AGGIAYGPAK EEQWGVQTRP VDFFDVKGDV ESLLWPLQAR FERAEHPALH PGRSARVVLN GRAIGWIGEL HPRWLQKYDL PTAPVVWELE LDAITAVGLP KYREVPRVPA VTRDIALVVR QDVAVQDLVD IFEKTAVGTP WERYLQGVVL FDEFRPKAAT AAIGAQEKSL AFRITLQDTD STLQDDIVEA ATQQLIRAAG DAFGARLRA
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