| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1634 |
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| Symbol | |
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| ID | 8019284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1736865 |
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| End bp | 1738295 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830414 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_002981590 |
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| Protein GI | 241663230 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.131349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.325388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGT TTCGCACCAA AAACGTGGAT CACATGATCC GCGCGGGCCA CAGCGATACC
GGCCTGAAGA AAGTCCTCGG ACCCCTCGAC CTGACATTGC TTGGTGTCGG CGCCATCATC
GGTACCGGCA TCTTCGTGCT GACTGGCACC GGCGCGCTGA CAGCGGGGCC GGCGCTCACG
CTGTCTTTCA TCGTCGCGGC GCTGGCCTGC GGTTTTGCCG CGCTGTGTTA CGCCGAATTT
GCCTCGACCA TTCCCGTGTC GGGCTCCATC TATACATATG CCTACGCCAC GATGGGCGAA
TTGGTCGCCT GGATCATCGG CTGGGATCTG ATGCTCGAAT ATGGCCTGGC CACCTCGGCT
GTTTCGGTGG GCTGGTCCGG CTATTTCCAG TCGCTGCTTT CAGGCTTCGG CCTGCACCTC
CCGGTGGCGC TCACAGCCGC ACCTGGCGCG ATTCCGGGCG TGCAGACGCT GTTCAACCTG
CCGGCGTTCG TGATCATGCT GCTGATCACG ACGTTGCTGT CGTTTGGCAT TCGCGAATCG
GCCCGCGCCA ACAACATCAT GGTGGCCATC AAGGTGACGG TGGTGCTGCT GTTCATCGTC
GTGGGTGTGC GCCATGTGCA GCCGGCCAAC TGGCAGCCGT TCATGCCGTT CGGCATGGAG
GGCGTGTTTG GCGCTGCGGC CATCGTGTTC TTCGCGTTCA TCGGCTTCGA CGCGGTGACG
TCCGCGGCCG AAGAGGTGCG CAATCCCAAG CGCGATTTGC CGATTGGCAT CATTGGTTCG
CTGGCGGTGT GCACGATCCT CTATGTGGTG GTGGCCGCGA TCATGACGGG CATCGTGCCG
TTCGCGAAGT TTGCGGGCGT GGATCACCCG GTGTCGCTGG CGCTCCAAGT GGCCGGTGAA
AACTGGGTGG CGGGCTTTGT CGATCTGGGC GCCATCATTG GCATGACGAC CGTGATCCTG
GTGATGGCTT ACGGTCAGAC GCGCATCATC TTCGCCATGT CGCGCGACGG CCTGCTGCCC
AAGCGCCTGT CGCACATTCA TCCGCGCTAC TCGACGCCGT TCCTCAACAC CTGGGTCGTG
GGGATTGTCT TTGCGCTGAT CGCCGCATTT GTTCCGCTGA ATGTGCTGGC TGAACTGATC
AACATCGGCA CGCTCGCCGC CTTCTCGTTG ATCGCCGTGG CCGTGCTGGT GCTGCGCCGG
ACCCGTCCGG ACCTGCATCG CGGCTTCCGC TGCCCTGGCG TGCCAGTGGT GCCGCTGCTG
GCGATCGGCC TGTGCCTGTT CCTGATGAGC CAACTGCAGG CTGTCACCTG GATCGCCTTT
GTGGTGTGGG TCTTGATTGG CTTGGTGGTG TACTTCGGCT ACGCGCGCCG TCGTTCGCTG
CTGCACGGTT CGGAGCCCGG ACCGGCACCG GTTTCCGAGA CGGTGCACTG A
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| Protein sequence | MSLFRTKNVD HMIRAGHSDT GLKKVLGPLD LTLLGVGAII GTGIFVLTGT GALTAGPALT
LSFIVAALAC GFAALCYAEF ASTIPVSGSI YTYAYATMGE LVAWIIGWDL MLEYGLATSA
VSVGWSGYFQ SLLSGFGLHL PVALTAAPGA IPGVQTLFNL PAFVIMLLIT TLLSFGIRES
ARANNIMVAI KVTVVLLFIV VGVRHVQPAN WQPFMPFGME GVFGAAAIVF FAFIGFDAVT
SAAEEVRNPK RDLPIGIIGS LAVCTILYVV VAAIMTGIVP FAKFAGVDHP VSLALQVAGE
NWVAGFVDLG AIIGMTTVIL VMAYGQTRII FAMSRDGLLP KRLSHIHPRY STPFLNTWVV
GIVFALIAAF VPLNVLAELI NIGTLAAFSL IAVAVLVLRR TRPDLHRGFR CPGVPVVPLL
AIGLCLFLMS QLQAVTWIAF VVWVLIGLVV YFGYARRRSL LHGSEPGPAP VSETVH
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