Gene Rpic12D_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1614 
Symbol 
ID8019264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1713086 
End bp1713667 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content59% 
IMG OID644830394 
Productphasin family protein 
Protein accessionYP_002981570 
Protein GI241663210 
COG category 
COG ID 
TIGRFAM ID[TIGR01841] phasin family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000449838 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTC AGGAACAGAT CGCTGCGGCG CACAAGGCCA ACCTGGAAAC GTTCTTCGGT 
CTGACCAACA AGGCTTTTGA AGGCGTCGAA AAGCTGGTCG AACTGAACCT GCAAGTCGTC
AAGGCGACCC TGGCCGAGAA CGTCGAACAC GCCAAGAAAG CGCTGACCGC CAAGGACGCA
CAAGAGCTGC TGTCGGTGCA AACCGCCGCT GTGCAGCCGC TGGCTGAAAA GGTTCTCGCT
TACAGCCGCC ACCTGTACGA AATCGCTTCG GACACGCAAA CCGAATTCAG CAAGGCTGCT
GAAGTGCAAA TCGCTGAAAA CAGCCGCAAG CTGCAAGCGC TGGTCGACAA TGTGTCGAAG
AACGCTCCGG CTGGTTCGGA ATCGGCAGTT GCCCTGGTGA AATCGGCTCT GTCGGCCGCC
AACAACGCCT ACGATTCGGT GCAGAAGGCC ACCAAGCAAG CTGTGGAACT GGCTGAAAGC
AACTTCCACG CTGCTGCCAA TGCCGCCAGC AAGGCAACCG CTCAGGCTTC GGCTCAAGCG
CGCGCTGCCA CCGGCAAGAA GTCGACGACG ACCGCTGCCT AA
 
Protein sequence
MLTQEQIAAA HKANLETFFG LTNKAFEGVE KLVELNLQVV KATLAENVEH AKKALTAKDA 
QELLSVQTAA VQPLAEKVLA YSRHLYEIAS DTQTEFSKAA EVQIAENSRK LQALVDNVSK
NAPAGSESAV ALVKSALSAA NNAYDSVQKA TKQAVELAES NFHAAANAAS KATAQASAQA
RAATGKKSTT TAA