| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1596 |
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| Symbol | |
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| ID | 8019244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1694455 |
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| End bp | 1696821 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830374 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_002981552 |
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| Protein GI | 241663192 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.702606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0459363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGCT TTCCATCGCA CTCTCTGGAA GCAATGACTG ATTCCGTGTT GCAGAAGATC
GTCTCCCGCA TCGCCACTGA ACTGGCGGTC CGGCCGCAGC AGGTTGCCGC CGCCGTGCAA
CTGCTGGACG AAGGCGCCAC CGTGCCCTTC ATCGCGCGGT ACCGCAAGGA AGTGACGGAC
AACCTGGACG ACACGCAACT GCGCAACCTG GAAGAGCGCC TGCTGTACCT GCGCGAACTG
GAAGACCGCC GCGCGGCCAT CCTCGCCTCC ATTGAAGAGC AAGGCAAGCT GACCGATGCC
CTGCGCACCG CCATCGAGGC GGCCGAGACC AAGCAGGTGC TGGAAGATCT CTACCTGCCC
TACAAGCCCA AGCGCCGCAC GCGCGCCCAG ATCGCCCGCG AATGCGGCCT GGAGCCGCTG
GCCCAGGCGC TGCTGGCCGA CCCCACGCTT GATCCGCAAA CCGAAGCCGC CAAGTTCGTG
AACGGCAACC CGACCGCCGA TGGCGGTGTG CCGGACGTGA AGGCAGCGCT GGACGGCGCG
CGCGACATCC TCTCCGAGCA GTTTGGCGAG ACGGCGGAGC TGCTTGGCAA GGTGCGCGAC
CACCTCTGGA ACCAAGGCCA GGTGTCGTCG ACCGTGGTGG AAGGCAAGGA AACTGCCGAA
GAAGAAAAAT TCCGCGATTA CTACGCGTAT AGCGAGCCGA TCCGCAACGT GCCGTCGCAC
CGCGCGCTGG CCCTGTTCCG CGGCCGCAAC GCCGGCGTGC TGTTCGTCAA ACTCGGACTC
GGCGAAGAAC AGGACGCGCT GAACCCGCAC CCGTGCGAAA TCATGATCGC GCGCCATGTC
GGCATCGAAA ACAGGGGCCG CGCGGCAGAC AAGTGGCTGT CAGACGTGTG CCGCTGGTGC
TGGCGCGTGA AGGTGCAACC GCATATCGAG ACCGAGTTGC TCACGCAACT GCGCGAGTCC
GCAGAAGCCG AGGCCATCAA GATCTTCGGC CGCAATCTGC ACGACCTGCT GCTGGCCGCG
CCGGCTGGCC CAAAGGCCGT GATGGGCATC GATCCGGGCA TCCGCACCGG TTGCAAGGTG
GCCGTGGTCG ACTACACCGG CAAGCTGCTG GAGACGGCCA CCATTTATCC GCACGAGCCG
CGTCGCGACT GGAACGGCTC GCTGGCCACG CTCGCGCGGC TGGCGAAACA GCATGGGGTG
GCATTGGTCT CGATCGGCAA CGGCACGGCA AGCCGTGAGA CCGACAAATT GGTGCAAGAC
CTGATGCGCA ACGCGCCGGA GCTGAAGCTG ACCAAGATCG TGGTGAGCGA AGCTGGCGCG
TCGGTGTATT CGGCATCGGA ATTGGCCGCC AAGGAATTCC CGGAACTGGA CGTGTCGCTG
CGAGGGGCGG TGTCGATCGC ACGACGCCTG CAGGACCCGC TGGCGGAACT CGTGAAGATC
GACCCGAAGT CGATCGGCGT CGGCCAGTAT CAGCATGACG TGAACCAGCG CGAGCTGGCC
CGCGCGCTGG ACGCCATCGT CGAGGATTGC GTGAACGCGG TCGGCGTGGA TGTGAACACG
GCCTCTGCCC CGCTGCTGGC GCGTGTATCC GGCCTGAACT CCATCCTCGC CAAGAACATC
GTCGAGTACC GCGATGCCAA CGGCGCGTTC CCCAACCGCG ATGCGCTCAA GAAAGTGCCG
CGCCTGGGCG ACAAGACCTT CGAGCAGGCC GCCGGCTTCC TGCGCATCAA TGACGGGGAC
AATCCGCTCG ACCGCTCCTC GGTGCATCCG GAAGCGTATC CGGTCGTCAA GCGCATTCTG
GACAGCATCA AGAAGGGCAT CGGCGACGTA CTCGGCAACC GCGAGGCACT GCGTGGCCTA
GCCGCCGGTG ACTTCACCGA CGAGAAGTTC GGCCTGCCCA CGGTGGTCGA CATCCTCTCT
GAACTGGAAA AGCCCGGCCG CGACCCGCGC CCCGAGTTCA AGACGGCGAC GTTCCAGGAC
GGCGTGGAAG ACATCAAGGA CCTGCAGCCC GGCATGGTGC TCGAAGGCGT GGTGACGAAC
GTGGCGGCGT TTGGCGCCTT CATCAACATC GGCGTGCATC AGGACGGCCT GGTACACGTG
TCGGCGCTGT CGACCAAGTT TGTGCGTGAT CCGCATGAGG TGGTCAAGCC CGGCCAGATC
GTCAAGGTCA AGGTGATGGA GGTGGACGTG AAGCGCAACC GCATCGGCCT GACGATGCGC
CTATCGGATG AGCCCGGTCA GACGGCCGCA CGCACCGGCG GCGGTGATCG CCCGAGCACC
GGCGGCGGTC GCCACGGCGG TCAGCAACGT CGTGCGCCGG AACCGTCCGG CGCCATGGCA
GAAGCGTTCG CCAAGCTCAA GCGCTAG
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| Protein sequence | MRGFPSHSLE AMTDSVLQKI VSRIATELAV RPQQVAAAVQ LLDEGATVPF IARYRKEVTD
NLDDTQLRNL EERLLYLREL EDRRAAILAS IEEQGKLTDA LRTAIEAAET KQVLEDLYLP
YKPKRRTRAQ IARECGLEPL AQALLADPTL DPQTEAAKFV NGNPTADGGV PDVKAALDGA
RDILSEQFGE TAELLGKVRD HLWNQGQVSS TVVEGKETAE EEKFRDYYAY SEPIRNVPSH
RALALFRGRN AGVLFVKLGL GEEQDALNPH PCEIMIARHV GIENRGRAAD KWLSDVCRWC
WRVKVQPHIE TELLTQLRES AEAEAIKIFG RNLHDLLLAA PAGPKAVMGI DPGIRTGCKV
AVVDYTGKLL ETATIYPHEP RRDWNGSLAT LARLAKQHGV ALVSIGNGTA SRETDKLVQD
LMRNAPELKL TKIVVSEAGA SVYSASELAA KEFPELDVSL RGAVSIARRL QDPLAELVKI
DPKSIGVGQY QHDVNQRELA RALDAIVEDC VNAVGVDVNT ASAPLLARVS GLNSILAKNI
VEYRDANGAF PNRDALKKVP RLGDKTFEQA AGFLRINDGD NPLDRSSVHP EAYPVVKRIL
DSIKKGIGDV LGNREALRGL AAGDFTDEKF GLPTVVDILS ELEKPGRDPR PEFKTATFQD
GVEDIKDLQP GMVLEGVVTN VAAFGAFINI GVHQDGLVHV SALSTKFVRD PHEVVKPGQI
VKVKVMEVDV KRNRIGLTMR LSDEPGQTAA RTGGGDRPST GGGRHGGQQR RAPEPSGAMA
EAFAKLKR
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