Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1582 |
Symbol | rimO |
ID | 8019230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1680299 |
End bp | 1681660 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830360 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_002981538 |
Protein GI | 241663178 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.386337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0216178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACG TCAGTACCCA GAGCCCCAAG GTGGGGTTCG TCAGTCTCGG TTGTCCCAAG GCCTTGGTCG ATTCCGAGCA GATCATCACC CAACTGCGTG CGGAGGGGTA TGAGATTTCC GGCACGTACG GCGGGGCGGA CCTAGTGGTC GTGAACACCT GCGGTTTCAT CGACGAGGCC GTGCAGGAAA GCCTGGATGC GATTGGCGAG GCGCTGGCCG AGAACGGCAA GGTGATCGTG ACCGGCTGCC TGGGTGCCAA AAAGGACGCT GCCGGCCAAG ACATCATCAC CAGCGTGCAC CCGAAGGTGC TGGCTGTGAC CGGGCCGCAT GCGCTGGGCG AGGTGATGGA GGCAGTGCAC ACGCACCTAC CCAAGCCGCA CGACCCGTTC ATTGACCTTG TGCCGCCACA GGGCATCAAG CTGACGCCCA AGCACTACGC GTATCTGAAG ATTTCCGAGG GCTGCAACCA CCGTTGCAGC TTCTGCATCA TCCCGTCGAT GCGCGGCGAT CTTGTCTCGC GCCCGGTGGC AGAAGTGATG CTGGAGGCCG AAAACCTGCT GAAGGCCGGC GTGAAGGAGC TGCTTGTCAT CTCGCAGGAC ACCAGCGCTT ATGGGGTAGA CGTCAAATTC CGCATGGGCT TCTGGAACGG TCGCCCGCTG AAGACGCGCA TGACCGAGCT GGTGGGTGCG CTGGGTGAAC TGGCGGCGCA GTACGGCGCC TGGGTGCGCC TGCACTATGT CTACCCGTAT CCGAGCGTGG ATGAGGTGAT GCCGCTAATG GCCGAGGGCA AGGTCCTTCC GTATCTGGAC GTGCCGCTGC AACACGCCCA CCCCGACGTG CTCAAGCGCA TGAAGCGGCC GGCCAACGCC GAAAAAACGT TGGACCGCAT CCGCGCCTGG CGCGAGGTAT GCCCAGAGCT GACCATCCGC AGCACGTTCA TTGCCGGTTT CCCGGGCGAG ACGGAAGAGG AGTTCCAAAC GCTGCTCGAC TTCATTGCCG AGGCCGAGCT GGACCGCGTG GGCTGCTTCG CCTATTCGCC GGTGGAGGGC GCCACCGCCA ACGACCTGCC GGGCGCATTG CCCGATGAGG TGCGCGAGGA GCGCCGCGCG CGCTTCATGG AAGTCGCCGA GCGCGTGTCT GCGCGCCGTC TGCAGCGCAA GGTTGGCAAG TCGCTGCGCG TGCTTGTGGA CGAAGTGAAT CAGGACGGCG GCATCGGCCG TTCATCGGCG GATGCCCCGG AGATTGACGG CCTCGTCTAT ATCGCGCCGC CGTCGAAGCC GTACAAGCGC TATAAGGCGG GCGATTTCGT GTCGGTCAAG ATTACCGGCG CGGATGGCCA CGACCTGTGG GGCGAGGTCT GA
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Protein sequence | MSDVSTQSPK VGFVSLGCPK ALVDSEQIIT QLRAEGYEIS GTYGGADLVV VNTCGFIDEA VQESLDAIGE ALAENGKVIV TGCLGAKKDA AGQDIITSVH PKVLAVTGPH ALGEVMEAVH THLPKPHDPF IDLVPPQGIK LTPKHYAYLK ISEGCNHRCS FCIIPSMRGD LVSRPVAEVM LEAENLLKAG VKELLVISQD TSAYGVDVKF RMGFWNGRPL KTRMTELVGA LGELAAQYGA WVRLHYVYPY PSVDEVMPLM AEGKVLPYLD VPLQHAHPDV LKRMKRPANA EKTLDRIRAW REVCPELTIR STFIAGFPGE TEEEFQTLLD FIAEAELDRV GCFAYSPVEG ATANDLPGAL PDEVREERRA RFMEVAERVS ARRLQRKVGK SLRVLVDEVN QDGGIGRSSA DAPEIDGLVY IAPPSKPYKR YKAGDFVSVK ITGADGHDLW GEV
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