Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1579 |
Symbol | |
ID | 8019227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1677056 |
End bp | 1678267 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830357 |
Product | cystathionine beta-lyase |
Protein accession | YP_002981535 |
Protein GI | 241663175 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.55911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0365901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGACG ACACCAAGCT CCCGCCGATG TTTCCCGCGA CCCAGGCGGT ACACCCGGAA TTGCAGATCC CGCCGGGCTT TGCAGCGTTC TCGCATGCCA CGCATCGTGC GTCGACCGTG GTGTTCAAGA ATCTTGCCGA TATGCGCGCC TTCGGCAGCG GCAGCGTGGT GCACTGGCGC TATGGCCTGC ATGCCACGCC AACTTCCGAC ACGCTGTGCC AGGCCCTTGC GCAGATCGAA GGCGGTTCGC ACACGCTGCT GCTGCCTTCC GGGCTGGCGG CGATTTCGCT GGTGTACTTC ACGCTTATCA AATCCGGCGA CGACGTGCTG ATTCCAGACA ACGCCTATGG CCCGAACCGT GACCACGGCG AATGGATGGC GCGCCAGTTC GGCATTACCG TGCGCTATTA CGATCCGATG ATCGGCGCCG GCATTGCCGA CCTGATCCGT CACAACACCA AACTCGTGTG GCTCGAAGCG CCGGGTTCGG TGACGATGGA GGTGCCCGAT TGCACGGCCA TCGCCGAGGT GGCGCGCAAG GCCGGCGCCA TTACGGCAAT CGACAACACG TGGAGTGGAG GCGTGTATTA CCAGCCTTTC GAGCACGGTA TCGACATCTC CGTGCAAGCG CTGACCAAGT ACCAATCAGG CGGCAGCGAC GTGCTCATGG GTGCCGCCAT CACGAATGAC GAAGCGCTGC ACCACAAGCT GCTGGCCACG CGGATGCGCA TGGGCTGGGG CGTTTCGGCG GACGATTGCT ATTTCGTGCT ACGTGGCCTG CCGAGCCTGC CGACGCGCTT GGCGGCGCAC GACTCGCATG CCCGCGAAGT GGCCGAATGG CTGGCGGATC GGCCGGAAGT CGTGCGCGTT CTGCACCCGG CGCTGCCGGA TTGTCCGGGC CATGAAAACT GGAAACGCGA CTTTACCGGC GCGAGCGGGT TGTTCTCGAT CGTGCTGCAC GAGCGCTATT CGCAGGCGCA GATCGATGCC TTTATCGAAG GCCTGCGTTA CTTTGCGATC GGTTTTTCGT GGGGCGGGGC GCACAGCCTC GCGCTGCCGT ACAACATCCC GTCGATGCGC ACAGCGACCG CCTGGCCGCC GGCTGATTGG GAGAACGCGG GCGGTTTCGT GCGGCTGTAT ATCGGGCTGG AAGATCCGCG TGATTTGATT GCGGATTTGA AGCAGGCGAT GGAAACGCAC CTGGGGGCTT GA
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Protein sequence | MNDDTKLPPM FPATQAVHPE LQIPPGFAAF SHATHRASTV VFKNLADMRA FGSGSVVHWR YGLHATPTSD TLCQALAQIE GGSHTLLLPS GLAAISLVYF TLIKSGDDVL IPDNAYGPNR DHGEWMARQF GITVRYYDPM IGAGIADLIR HNTKLVWLEA PGSVTMEVPD CTAIAEVARK AGAITAIDNT WSGGVYYQPF EHGIDISVQA LTKYQSGGSD VLMGAAITND EALHHKLLAT RMRMGWGVSA DDCYFVLRGL PSLPTRLAAH DSHAREVAEW LADRPEVVRV LHPALPDCPG HENWKRDFTG ASGLFSIVLH ERYSQAQIDA FIEGLRYFAI GFSWGGAHSL ALPYNIPSMR TATAWPPADW ENAGGFVRLY IGLEDPRDLI ADLKQAMETH LGA
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