| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1573 |
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| Symbol | ispF |
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| ID | 8019221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1668846 |
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| End bp | 1669352 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830351 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_002981529 |
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| Protein GI | 241663169 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.16505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0913823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTGGA TGGACATCCG CATTGGCCAA GGTTACGACG TGCACGCGCT GGTGGAGGGC
CGCAAGCTGA TTCTCGGCGG CGTGGAGATT CCGCACACCC GTGGCCTGCT CGGTCACTCC
GACGCAGACG CGCTGCTGCA CGCGATTACC GACGCGCTGT TCGGCGCCGC CGGGCTAGGC
GACATCGGCC GGCATTTTCC CGACACAGAT CCGGCGTTTG CCGGCGCCGA CAGCCGCATG
TTGCTGCGCG AAGCCGTGCG CCGCGTGCAC AAGGCCGGCT ACGCGGTCGG TAATGTCGAC
GCGACCGTCA TCGCGCAGAA GCCGAAGCTC GCGCCGCACG TGCCGGGCAT GGTGGCGAAC
CTTGCCGAAG ACTTGGGCAT TGCGCCCGAG CGTTGCAACG TCAAGGCCAA GACGAATGAG
AAGCTCGGCT TCGAAGGCAA GGAGGAAGGC ATCGTTGCGC AGGCGGTGGT GTTGATCTAT
CGCGCAGAAG CCGCTGAGCA GGACTGA
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| Protein sequence | MNWMDIRIGQ GYDVHALVEG RKLILGGVEI PHTRGLLGHS DADALLHAIT DALFGAAGLG
DIGRHFPDTD PAFAGADSRM LLREAVRRVH KAGYAVGNVD ATVIAQKPKL APHVPGMVAN
LAEDLGIAPE RCNVKAKTNE KLGFEGKEEG IVAQAVVLIY RAEAAEQD
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