| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1567 |
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| Symbol | |
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| ID | 8019215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1662868 |
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| End bp | 1664505 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830345 |
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| Product | Protein of unknown function DUF1800 |
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| Protein accession | YP_002981523 |
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| Protein GI | 241663163 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00854272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.266743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATCC ATAGCACCAC GATCTTCTTG GCGCTGGCAG CCGTCTGCGC ACTTTCACTG
CAGACCACGC ACGCGGCAAC GCACAATAAG CCGCATCGCC ACACTGCGCA AGCCAAGGCG
CCGGCCGCCG ACGAGCAACG CCTCGACCGC GACGATGCGC GCTATTTCCT CACCCGCGTC
GGCTTTGCGC CTTCCGAGAG CGAACTCGAC GCCTACGCCG GACTCACGCA CCGCGAAGCC
GTCGACCGGG TGCTCGCGCA GACGGGCACC ATTGCCACGC AAACGCCCCC GGCGTGGGTG
AACGAACCGA TCATCCCCTA CAACAAGCTG CCCGACGAAG ATGCCCGCAA GGCGGCGCGC
CAGAAGAATG CTGCGCACGA GCTGGAATTG CGGGCCTGGT GGATGGGCGA GATGATCAGG
ACGCCGTCGC CGCTGACAGA ACGCATGACG CTGTTCTGGC ACAACCATTT CGTTTCCAGT
TCGCAGAAGG TGCCGTTCGC GCAATTGATG TATCGGCAAA ACGTGCTGCT CCGGCAGAAC
GCGGTGGGCA ACTTCGGCAC CATGCTGCAT GCCATCGGCA AAGACCCGGC GATGCTGATT
TATCTGGATG GCGCCGAGAG CCGCAAGGGC AAGCCGAACG AGAACTTCGC GCGCGAGGTG
ATGGAGCTTT TCACGCTGGG TGAAGGCCAT TACACCGAAC AGGACATCAA GGAAGCCGCG
CGCACCTACA CAGGCTGGAG CATCGACCGC GAGCACGATT TCACCTACAT CTGGCGGCCG
CAGATACACG ACACGGGCGT GAAGACTGTG TTTGGCCAGA GCGGCGATTA CGACGGCGAC
CAGATGCTCG ACATCCTGCT GTCTCGCCCC GAGACGGCCA ACTTCATCGT TACCAAGCTT
TGGCGCGAGT TCATTTCGCC TGACGTAGAT GCGGCACAAG CGCAGCGCGT GGCCGATGCG
TTCCGGGCAA GCGGCTACGA CATCAAGGTG GCGTTGCGCG AGCTGTTCCT CACCCAGGCG
TTCTGGGCGC CGCAATCGCG CGCAACGCTC GTGAAGTCCC CGGTGGAAAT GATCGTCGGC
ACGCTCAAGC AGTTCAATGT GCAGTACACC GACCCGACGC CGTTTGCCAT CAAGTCGGCG
CAGCTAGGGC AGAACCTGCT GGCCCCGCCC AACGTGAAGG GCTGGCCGGG CGGCGATGCG
TGGATCAACG CGACGACGTT GCTGGGGCGC AAGCAGTTCC TCGACCAACT CTTCCGCTCC
ACGGAAATGA AGGCGCCGGC AGCCCAGCAG CAGGCCCAGC AACAGAGCCA ACAACAGAAG
CCCGGCATGA TGATGGCCGC CATGCGCGAA GACCTGAAGC AGGGCGGCGC CGTGCAGGGT
CTGGGGCAGG CGCTCAAGGG CATGGGCCAG GAGGGCCGCT TCAAGCTGGC GCAGTCGCAG
ACGATGGTGT CGTTCAACTC AGCCAAATGG CTGGCGCAGT TTGGCGCGGA TGGAGATGAC
CCTCCGCAAC TGGCCCCACG CATTTCGATC CAGCGCGCCG TGTTGCCCAT CGAGCCGACC
GCGCCGATTC CCGTCAAGCT GGCCGGTACG GCGTACCTGC GCACGCTGAT GATGGACCCG
GCATACCAGT TGAAGTAA
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| Protein sequence | MRIHSTTIFL ALAAVCALSL QTTHAATHNK PHRHTAQAKA PAADEQRLDR DDARYFLTRV
GFAPSESELD AYAGLTHREA VDRVLAQTGT IATQTPPAWV NEPIIPYNKL PDEDARKAAR
QKNAAHELEL RAWWMGEMIR TPSPLTERMT LFWHNHFVSS SQKVPFAQLM YRQNVLLRQN
AVGNFGTMLH AIGKDPAMLI YLDGAESRKG KPNENFAREV MELFTLGEGH YTEQDIKEAA
RTYTGWSIDR EHDFTYIWRP QIHDTGVKTV FGQSGDYDGD QMLDILLSRP ETANFIVTKL
WREFISPDVD AAQAQRVADA FRASGYDIKV ALRELFLTQA FWAPQSRATL VKSPVEMIVG
TLKQFNVQYT DPTPFAIKSA QLGQNLLAPP NVKGWPGGDA WINATTLLGR KQFLDQLFRS
TEMKAPAAQQ QAQQQSQQQK PGMMMAAMRE DLKQGGAVQG LGQALKGMGQ EGRFKLAQSQ
TMVSFNSAKW LAQFGADGDD PPQLAPRISI QRAVLPIEPT APIPVKLAGT AYLRTLMMDP
AYQLK
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