Gene Rpic12D_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1528 
Symbolpgi 
ID8019173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1618344 
End bp1619963 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content65% 
IMG OID644830305 
Productglucose-6-phosphate isomerase 
Protein accessionYP_002981486 
Protein GI241663126 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.561375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.223338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAG CCCTACCCGC CTGGCAGTCC CTGACGCAAC ATGCAGAATC GATCCGCGCA 
GCACATATGC GCGACTGGTT TGCCGCGCCG GATGCCGAAG AACGGGTACG CGCGTTCACG
CTGGATGCGG CTGGCCTGAC GGTCGATTAC TCAAAAAACC GCCTCACCCC CGAGACCCTG
GCGCTGCTAC TGCAACTTGC GGACGAGGCT GGCGTGCTTG CGCTGCGCGA TGCCATGCTG
CGTGGCGACC GCATCAACAA CACCGAGCAC CGCTCCGTCC TCCACGTGGC CCTGCGCGGA
CAATTGGAAG ACGACTATCG CGCCGATGGC GAGCCCGTCA TGCCCGAAGT GCTGCGCGTG
CGGGCGCAGA TGCACGACTT CGCCAACCGC GTGCATAGCG GCGCGTGGAC GGGCCATTCC
GGGCAGCGCA TCACCGACGT GGTGAACATT GGCATCGGCG GTTCGGACCT CGGCCCGCGC
ATGGTGTGCC GCGCGTTGGA GCACCTTGCC GTGCCACAGG TGCGCGTGCA TTTCGTCTCC
AACGTCGACG GTACGGATTT GGCCGAAACG CTCGACCATC TCAACCCCGG TACCACGCTC
GCGATTGTCT GTTCGAAGAC GTTCACCACG CTCGAAACAA TGGCGAACGC GCACAGCATG
CGCCGTTGGT TTGTCGAGCA TGGCGTAGCT GAAGACCAGC TCAGGCACCA CTTCGTCGCT
GTCTCCACCA ACCGCGAGGC CGTCGTCCAG TTCGGCATCG ACCCGGACAA CATGTTCACG
TTCTGGGATT GGGTTGGCGG GCGGTTCTCG CTGTGGTCGG CGGTGGGCCT GTCGATCGTG
CTGGCAATCG GGCCGCAGCA ATTCGAAGCG ATGCTTGATG GCGCGCGCGC CATGGACCGC
CACTTCGCCA CGGCCGCGCC GCGTGAAAAC TTGCCGCTCA TTCTCGGGAT GCTGTCGGTC
TGGTATCGCG GCTTCTTCGA CGCGGCGAGT GCCTGTACCG TGCCCTACTG CGCGCCGCTG
GAGCTGCTAA CCGACTTCAT GCAACAGTTG GAGATGGAGA GCAACGGCAA ATCCGTCCAA
CGCAACGGCG CGGCCATCGA TACCGACACC GGCCCCATCG TCTGGGGCAC GGCCGGCACC
AACGGGCAGC ATGCGTATTT CCAGTTGATC CACCAGGGCT CGCAGATCGT GCCCGTGGAT
TTCATCACCA CACTCGAGCC GGTGCGCACC CTGCCCGGCC ACCACGCCAA ACTGCTCGCG
AACTGCTTTG CGCAGGGCGA GGCGCTGCTG CTGGGGCGCA CCGCCGAGGA GGTCCGCGCG
GGCGGCGTCA CCGACGAAGC GCTGGTGCCG CACATGGTGT TCGAAGGCAA TCGCCCGAGC
ACGACCATCC TGATGGAAAG GCTGGACGCT GCGTCACTGG GCGCACTCAT CGCCTGCGCC
GAGCACCGCA CCTTCGTGCA GGGTGCGGTG TGGAACATCA ACTCGTTCGA TCAGTGGGGC
GTGGAGCTTG GCAAGAAACT CGCCAAGCCG ATCCAGGCGG AACTGGAAGG GGCTCCGGCC
TCGGTGGCGC ATGACGCATC GACGGCGGCG TTGATCCGCC GCGCCAAAGT CGCGCTCTGA
 
Protein sequence
MPTALPAWQS LTQHAESIRA AHMRDWFAAP DAEERVRAFT LDAAGLTVDY SKNRLTPETL 
ALLLQLADEA GVLALRDAML RGDRINNTEH RSVLHVALRG QLEDDYRADG EPVMPEVLRV
RAQMHDFANR VHSGAWTGHS GQRITDVVNI GIGGSDLGPR MVCRALEHLA VPQVRVHFVS
NVDGTDLAET LDHLNPGTTL AIVCSKTFTT LETMANAHSM RRWFVEHGVA EDQLRHHFVA
VSTNREAVVQ FGIDPDNMFT FWDWVGGRFS LWSAVGLSIV LAIGPQQFEA MLDGARAMDR
HFATAAPREN LPLILGMLSV WYRGFFDAAS ACTVPYCAPL ELLTDFMQQL EMESNGKSVQ
RNGAAIDTDT GPIVWGTAGT NGQHAYFQLI HQGSQIVPVD FITTLEPVRT LPGHHAKLLA
NCFAQGEALL LGRTAEEVRA GGVTDEALVP HMVFEGNRPS TTILMERLDA ASLGALIACA
EHRTFVQGAV WNINSFDQWG VELGKKLAKP IQAELEGAPA SVAHDASTAA LIRRAKVAL