| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1522 |
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| Symbol | |
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| ID | 8019167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1608554 |
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| End bp | 1609318 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830299 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002981480 |
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| Protein GI | 241663120 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0490038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.520511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA CCCGCACCCC CATCGCGATC ATCACCGGCG GCAGCCGCGG CCTTGGCAAG
AACATGGTGC AGAAGCTGGC CCAGCGCGGC ACCGACGTGA TCTTCACCTA CCGCTCCAAC
CGCGCTGAAG CCGATGCCCT CGTCGCCGAA CTGACTGCCC AGGGCCGCCG TGCCGCAGCC
TTGCAGCTCG ACACCGGCAA GATCGCCACG TTCCCCGCCT TTGCCGAGGC CGTGCGCGGC
GTGCTGACTC GGTGGAAGGC CGAGCGCTTC GATTACCTCG TCAACAACGC CGGCGTGGGC
GTGCACGCCA CGGTGGCCGA AACCACTGAA GCCCAGTTCG ACGAACTGAT GAATGTGCAT
TTCAAAGGCG TGTTCTTCCT CACGCAGATC CTGCTGCCGC TCATGGCTGA CGGCGGGCGC
ATCGTCAATA TCTCGTCGGG GCTGGCGCGC TTTGCGCTGC CGGGTTACGG CGCGTATGCG
GCAATGAAGG GCGCGGTGGA GGTGCTGACG CGCTATCTGG CGAAGGAGCT GGGGCCGCGC
GGCATTGCTG TGAATGTGGT GGCACCGGGC GCCATCGAGA CTGACTTTGG CGGCGGTGCC
GTGCGCGACA ACGCGAGCCT CAACGCGATG GTCGCGTCCA ATACGGCGCT GGGGCGCGCT
GGTGTGCCGG ACGATATCGG TGGTGTGGTG GCATCGTTGT TGTCGCCGGA TAACCGCTGG
ATCAACGCCC AACGCATTGA GGCATCGGGC GGGATGTTCC TGTAA
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| Protein sequence | MTQTRTPIAI ITGGSRGLGK NMVQKLAQRG TDVIFTYRSN RAEADALVAE LTAQGRRAAA
LQLDTGKIAT FPAFAEAVRG VLTRWKAERF DYLVNNAGVG VHATVAETTE AQFDELMNVH
FKGVFFLTQI LLPLMADGGR IVNISSGLAR FALPGYGAYA AMKGAVEVLT RYLAKELGPR
GIAVNVVAPG AIETDFGGGA VRDNASLNAM VASNTALGRA GVPDDIGGVV ASLLSPDNRW
INAQRIEASG GMFL
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