| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1521 |
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| Symbol | |
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| ID | 8019166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1606758 |
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| End bp | 1607594 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830298 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002981479 |
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| Protein GI | 241663119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00468579 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.67881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG CCAAACCGAT GTTTGCCCCG CACACCTCGC TCATTGAACG CATCTGGTAT
TTCGCGCTGC GCGGCCTGGC CGTGCTGACG CTGCTGTACC TCGTGCTGCC GGTGCTGGTG
ATCGTGCCGC TGTCGTTCTC ATCGAGCACG TTCCTCTCGT ACCCGATTCC GAGCTATTCG
CTGCGCTGGT ATCAGAACCT CGTCACGTCG GACGAATGGC GCATGGCCGC CAAGAACAGC
TTCATCGTCG CGCCGGCTGC CACCATCGTG GCAACAGTGC TCGGCACCCT CGCCGCCATC
GGACTGAACA AGGCCGACTT CCGCGGCAAG GGTCTGCTGA TGGCGGTGCT GGTGTCGCCG
ATGATCGTTC CGGTGGTGGT TGTGGGCGTC GGCATGTACC TGTTCTTTGC GCCGCTGGGG
CTGGCGAACA CGTATATCGG CCTGATCCTC GCGCATGCGG CGCTGGGCGT GCCGTTTGTG
GTGACGACGG TACTGGCGAC GCTGCAAGGT TTCAATCACA ACCTGGTTCG GGCGAGCCTG
TCGCTGGGTG CCAACCCGGT CATGACGTTC TTCCGCATCA CCCTGCCCGT CATCGCACCG
GGCGTGATTT CCGGCGCGCT GTTTGCGTTT GCCACGTCGT TTGACGAAGT GGTGGTGACG
CTCTTCCTGG CGGGGGCCGA CCAGGTGACG CTGCCGCGCC AGATGTTTAC CGGCATTCGC
GAAAACATCT CGCCGACGAT TGCGGCGCTG GCGACGATTC TGATTGTGTT TTCGACGTGT
CTGTTGCTGA CGTTTGAATG GCTGCGGGGG CGGGCTGCGG CTAAGGCGGT GGCGTAA
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| Protein sequence | MKLAKPMFAP HTSLIERIWY FALRGLAVLT LLYLVLPVLV IVPLSFSSST FLSYPIPSYS
LRWYQNLVTS DEWRMAAKNS FIVAPAATIV ATVLGTLAAI GLNKADFRGK GLLMAVLVSP
MIVPVVVVGV GMYLFFAPLG LANTYIGLIL AHAALGVPFV VTTVLATLQG FNHNLVRASL
SLGANPVMTF FRITLPVIAP GVISGALFAF ATSFDEVVVT LFLAGADQVT LPRQMFTGIR
ENISPTIAAL ATILIVFSTC LLLTFEWLRG RAAAKAVA
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