Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1518 |
Symbol | |
ID | 8019163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1603170 |
End bp | 1604258 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830295 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_002981476 |
Protein GI | 241663116 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0467578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCG ACGACGTGAT CGTCAGCTTT CGCGGTGTAC GCAAGACGTA TGACGGCGAA ACCCTCGTGG TCAAGCATCT GGACCTGGAC ATCTACCAGG GCGAGTTCCT CACCCTGCTC GGCCCCTCGG GCTCGGGCAA GACCACGTGC CTGATGATGC TGGCCGGGTT TGAATTCCCG ACCGGCGGCG AGATCCGGCT CGAAGGCGCG CTGCTCAACA ACGTGCCGCC GCACAAGCGC AACATCGGCA TGGTGTTCCA GAACTACGCG CTGTTTCCGC ACATGACGGT GGCGCAGAAC GTCGAGTACC CGCTGACCGT ACGCAAGCTG CCCGCCGCCG AACGTGCCGA GCGCGTGCAC AAGGCCCTGC AGATGGTTCG CATGGAAGGC TTTGCCAAGC GCTACCCCGC CCAGCTCTCC GGGGGCCAGC AGCAGCGCAT TGCACTGGCA CGCGCGCTGG TGTTCGAGCC CAAGCTCGTG CTGATGGACG AGCCGCTCGG CGCGCTCGAC AAGCAACTGC GTGAACACAT GCAGTACGAG TTGAAATCGC TGCACGAAAA GCTCGGCGTG ACCTTCGTCT ACGTGACGCA TGACCAGGGC GAGGCGCTCA CCATGTCCGA CCGCGTGGCC GTGTTCGACA AGGGCATCGT GCAGCAGCTC GACACGGTGG ACAGCCTCTA CGAACGCCCC TGCAACGAGT TCGTCGCCAA CTTCATCGGC GACAGCAACA CGCTGCGCGG CACCGTCATC CGGGTCGACG GCGATTACTG CGAACTGCAG CTCAACGACG GCGCCCGCGT GGTTGGCCGC AACGTCGCAG GTGCCAATAT CGGTGCCACC GCTACCGGCT GTATCCGCCC GGAGCGCATG CGCCTGGCCG AAGGCGCCTC CGCCGCCGGC AATGCGCTGG TGGGCCAGAC GCGCGGCCTC GTCTACTTTG GCGACCACGT GCGCATGCGC TGCGCCCTGC CCGACCAACC CGAATGTTTT GTGAAGGTGC CGCTGGGCAC GCGCGCGCTC GAAGGCTTCG CACCCGGCGC ACCGATCCAG CTTGAGTTCG CGCCTGAACA TCTGCGCGTT TTTGCATGA
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Protein sequence | MKTDDVIVSF RGVRKTYDGE TLVVKHLDLD IYQGEFLTLL GPSGSGKTTC LMMLAGFEFP TGGEIRLEGA LLNNVPPHKR NIGMVFQNYA LFPHMTVAQN VEYPLTVRKL PAAERAERVH KALQMVRMEG FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMDEPLGALD KQLREHMQYE LKSLHEKLGV TFVYVTHDQG EALTMSDRVA VFDKGIVQQL DTVDSLYERP CNEFVANFIG DSNTLRGTVI RVDGDYCELQ LNDGARVVGR NVAGANIGAT ATGCIRPERM RLAEGASAAG NALVGQTRGL VYFGDHVRMR CALPDQPECF VKVPLGTRAL EGFAPGAPIQ LEFAPEHLRV FA
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