Gene Rpic12D_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1462 
Symbol 
ID8019107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1544700 
End bp1545554 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID644830240 
ProductAnkyrin 
Protein accessionYP_002981421 
Protein GI241663061 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.640489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0122014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATACC CCGATAACTT GAAGCAAGCA CTGAACAAAA TCGCACTGAC TGGTGCGTTG 
ACGATGGCGC TGTCGGGTGT CGCACTCGCC ACGCCGCAGG ACGATCTGCG CAACGCCGTC
GAATACAACC GCCCGGCGCT GGTGCAGAAA TATGTCGCGC AGGGCGTGGA CCCCAACCTG
AAGACCCGCG ACGGTACGCC GCTGCTGGTG GATGCGCTCA AGGAGAAGAA CATCGAGGTG
GCCGAGGCGC TCATTCGCGC CAAGAACATC GATTTCGAGC GCACCAATGC CGCAGGCGAA
AACGCGCTGA TGATGGCCGC CTACCAGGGC CTGCTGCCCA TGGTGAAGCG CATGGTGGAA
ACGTACGAGG TGGAGGTCAA CAAGACCGGC TGGACCGCGC TGCATTACGC CGCCACCAAT
GGCTATGACG ACATCGTCAA ATACCTGCTC GACCACGCGG CCTATATCGA CGCGGAAAGC
CCCAACGCGA CCACGCCGCT GATGATGGCG GCCATGGGCG GGCACATCAC GACCGTCAAG
CTGCTGCTGG ACGAGGGCGC CGACATGAAC CTGCGCAACC AGCAGAAGAT GGACGTGATC
GACTTCGCCA AGCGGTATCA CCAGGATGAG ATTGCTGCGG GACTGGAATC GCGCCGGCGC
AAGTTGGCGG AGCAGTCCGG CAAGCCTGCT TCGGCGCCGG TGCCTGCGGC CGCAGTCTCG
CCGCCTGTGA AGGCCGCAGC GCCGGATGTG CCGACGCCGA TGCCGGCCGC CAAACGCGAC
GCCGGGGCGC CTAGCCCGGC TGGTCGAGAT ACGATCGGTA CGCCCACCAA CATGCTGTTT
GACAGCAAAC GATAG
 
Protein sequence
MRYPDNLKQA LNKIALTGAL TMALSGVALA TPQDDLRNAV EYNRPALVQK YVAQGVDPNL 
KTRDGTPLLV DALKEKNIEV AEALIRAKNI DFERTNAAGE NALMMAAYQG LLPMVKRMVE
TYEVEVNKTG WTALHYAATN GYDDIVKYLL DHAAYIDAES PNATTPLMMA AMGGHITTVK
LLLDEGADMN LRNQQKMDVI DFAKRYHQDE IAAGLESRRR KLAEQSGKPA SAPVPAAAVS
PPVKAAAPDV PTPMPAAKRD AGAPSPAGRD TIGTPTNMLF DSKR