Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1456 |
Symbol | |
ID | 8019101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1538299 |
End bp | 1539360 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644830234 |
Product | ABC transporter related |
Protein accession | YP_002981415 |
Protein GI | 241663055 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0461545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCG AATCCCTACA TCTCGCGCCC GTGCCCATCC GGCTGCGTGG CTGCGGAAAA CACTTTGGCG GCCAGCGCGT GCTGGAGTCG ATGGACCTCG ACATTGCTGC CGGCGAGACT GTCGTGCTGC TCGGCCCCTC GGGCTGTGGC AAGACGACCA CGCTGCGCAT CGTTGCGGGG CTGGAAGCGC CGGATGCCGG CGGCACCGTG CACTTTGGCG ACGAAGACGT CACCGCGCGC CCGATCGAGC GCCGCCGCGT CGGCATGGTG TTTCAGAGCT ACGCGCTGTT CCCGAACCTG AGCGTGCGCG GCAACGTCGA ATACGGCCTG CGCATCCAGC GCCGGCAGAA CGGTTTGTCC GACACGCAGA TCAGCGCCCG GGCTAACACG CTGCTGGAGA TGATGCACCT CACGCCGTAT GCGGATCGCG GTGTGGCCCA GCTTTCGGGC GGGCAGCGCC AACGCGTGGC CCTGGCGCGT GCGCTGGCAC CCGAACCGCG CGTGCTGCTG CTCGACGAAC CGCTTACGGC GCTCGACGCC AAGCTGCGCG AGTCCGTGCG TGCAGAGATG GACCGCCTGC TGCGCGGTCT CGGCATCACG ACGATTTATG TGACGCACGA CCAGGAAGAA GCGATGGCGC TGGCCGATCG CATCGTCGTC ATGGAAGCCG GCCGCATTGC GCAGATCGGC ACCCCGCGCG AGATCTACTT CCAGCCGGCC AACCGGCACG TGGCGGACTT CATCGGCATC ATGAACCGGC TCGACGGCAC GCGCGAGAAT GGCGCATTCG TCTGCGCGGG CGGCCGCGTA CCCGTGCCGG CCGGCGACGG CAATGCGATC TTCTTCCGCC CCGAAGATGC CGTGCTGGCC GACCCGGCCC AGGCGGCGCT GAAGGGCACG GTCGAGTCGG CGGTGTTTCT CGGCTTCCGC ACCCGCGTGC GCGTGGCGGG CGTGTCAGCC ACGCCGCTGT TTATTGATGT GCCCGGCCGC CAGCACTTTG CGCCGGGCCA TGCGGTCGGC TTCGATATCC CGGCAGACCG CCTCCTGACC TTGCAAGCCT GA
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Protein sequence | MSTESLHLAP VPIRLRGCGK HFGGQRVLES MDLDIAAGET VVLLGPSGCG KTTTLRIVAG LEAPDAGGTV HFGDEDVTAR PIERRRVGMV FQSYALFPNL SVRGNVEYGL RIQRRQNGLS DTQISARANT LLEMMHLTPY ADRGVAQLSG GQRQRVALAR ALAPEPRVLL LDEPLTALDA KLRESVRAEM DRLLRGLGIT TIYVTHDQEE AMALADRIVV MEAGRIAQIG TPREIYFQPA NRHVADFIGI MNRLDGTREN GAFVCAGGRV PVPAGDGNAI FFRPEDAVLA DPAQAALKGT VESAVFLGFR TRVRVAGVSA TPLFIDVPGR QHFAPGHAVG FDIPADRLLT LQA
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