| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1446 |
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| Symbol | |
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| ID | 8019091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1526337 |
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| End bp | 1526984 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830224 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_002981405 |
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| Protein GI | 241663045 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00452839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.703119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGCTT TTGATTCGAT TGACGGACTG GTGGTGCCGC TTGACCGCGC CAATATCGAC
ACCGACGCCA TCCTGCCAAA GCAATACCTG AAGATGATCG GCAAGACCGG TTTTGGGCCT
TACCTGTTCG ACGAGTGGCG CTATCAGGAC CGCGGTGAAC CGGAGCAGGA TTGCTCGACG
CGCCCGCGCG TGCCGGATTT TCCGCTCAAT CAGGCCCGCT ATGAGGGCGC GCAGATCCTG
CTGGCGCGCG AGAACTTCGG TTGCGGCTCC AGCCGCGAGC ATGCGCCGTG GGCGCTCCGG
GATTGGGGCA TCCGCGCGCT CATCGCCCCG AGCTTTGCCG AGATATTCCA TGGCAATTGC
TTCAAGAACG GGCTGCTGCC GATCGTGCTG GACACCGACG TGGTAGACCG CCTGTTCGGG
GCCGTCGCAC GCACGCCCGG CTATCGGCTG CAGGTCGACC TGGCCGGGCA GTCGGTAACG
ACGCCGGACG GCAACGTGTA CCGCTTCGAC ATCGACCCTT TCCGAAAAGA CTGCCTGCTG
CGCGGGCTCG ATGAAATCGG CCTGACGCTG CAGCACCGCA GCGCCATCGC CGCATTCGAG
CAGGCGCGCA GCACCGCGGA ACCCTGGCTA TTCAACTCAC CAGCATAA
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| Protein sequence | MQAFDSIDGL VVPLDRANID TDAILPKQYL KMIGKTGFGP YLFDEWRYQD RGEPEQDCST
RPRVPDFPLN QARYEGAQIL LARENFGCGS SREHAPWALR DWGIRALIAP SFAEIFHGNC
FKNGLLPIVL DTDVVDRLFG AVARTPGYRL QVDLAGQSVT TPDGNVYRFD IDPFRKDCLL
RGLDEIGLTL QHRSAIAAFE QARSTAEPWL FNSPA
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