Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1427 |
Symbol | |
ID | 8019072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1509235 |
End bp | 1510170 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830206 |
Product | catechol 1,2-dioxygenase |
Protein accession | YP_002981387 |
Protein GI | 241663027 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.322187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTGC GCGTATTCCA AACGAAAGAA GTGCAGGACC TGCTGAAGGC CGCTACCAAC CTGGATGGCA ACGAAGGTAA CGCCCGCCTG AAGCAGATCA CCCACCGCTT GCTGGCGGAC CTGTTCAAGG CCATCGACGA TCTCGACATC ACGCCGGATG AAGTCTGGGC CGGCATCAAT TACCTGAACA AGCTTGGCCA GGACGGAGAG GCTGCATTGC TGGCTGCCGG CGTGGGCCTG GAGAAGTATC TCGACATCCG CATGGACGCC GCCGACGAGG CGCTTGGTCT CAATGGCGGG ACGCCGCGCA CGATCGAAGG CCCGCTGTAC GTGGCGGGCG CAACGGTGCG CGATGGCGTG TCCCGCATCG ACGTGGATCC GGACCCCGCC GCAGGCCCGT TGATCATTCA CGGCACGGTA ACCGGCCAGG ACGGCAAGCC GGTCGCCGGC GCCTTGGTCG AGTGCTGGCA TGCGAATTCG AACGGTTTCT ACTCGCACTT TGACCCGACC GGCGAGCAGA GCCCGTTCAA CCTGCGCGGC GCGGTCCGGA CCGGTGCCGA CGGCAAATAC GAATTCCGCA CGCTCATGCC CGTGGGCTAC GGCTGCCCGC CAGAGGGTGC GACCCAGCAA CTGCTGAACG GACTGGCGCG CCACGGCAAC CGGCCGGCGC ACGTGCACTT CTTCGTCACG AGCGACGGCC ACCGCAAGCT GACGACGCAA TTCAACATCG AAGGCGATCC GCTGATCTGG GACGACTTCG CCTACGCCAC CCGTGAAGAA CTGATTCCGC ACGTGGTGGA AAAAACCGGC GGCGGCGCGC TGGGCCTGAA AGCCGATGCG TACAAGGACA TCGAATTCAA CTTCGTGCTC ACGCCGCTGG TTCAGGGCAA GGACAACCAG CGCGTGAATC GCCTGCGCGC TTCGGCCGAG GCCTGA
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Protein sequence | MNVRVFQTKE VQDLLKAATN LDGNEGNARL KQITHRLLAD LFKAIDDLDI TPDEVWAGIN YLNKLGQDGE AALLAAGVGL EKYLDIRMDA ADEALGLNGG TPRTIEGPLY VAGATVRDGV SRIDVDPDPA AGPLIIHGTV TGQDGKPVAG ALVECWHANS NGFYSHFDPT GEQSPFNLRG AVRTGADGKY EFRTLMPVGY GCPPEGATQQ LLNGLARHGN RPAHVHFFVT SDGHRKLTTQ FNIEGDPLIW DDFAYATREE LIPHVVEKTG GGALGLKADA YKDIEFNFVL TPLVQGKDNQ RVNRLRASAE A
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