Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1401 |
Symbol | |
ID | 8019046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1479625 |
End bp | 1480518 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830180 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002981361 |
Protein GI | 241663001 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.025944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATCG ATATCCGAGC CCTTCGTTAC TTTGTCGAAA CCGCGCGGCT GCAGAGCTTC ACGCAGGCGG CGAGCTCGCT CTCGGTGACA CAGTCCACCA TCAGCAAGAT GGTGCGTCAG CTCGAAAACG AGGTCGGCCA GCCGCTGCTG ATCCGCGAAG GCCGGCAGGT GCGGCTCACT GACGTGGGCC GGGTCGTGTA CGCACGCGGG CAGGAAACGC TTGGCGTGGT GCACAGGCTG ACGCTTGAAG TCGCTGATCT GTCCTCGCTC GGACGGGGCG AACTGACGGT CGGCATCCCA CCGATGGTGA ATCTGTTCTT TTCGCCCGTC GTGAGCGCGT TTCGTCAGCG TTATCCGAAT CTGGTACTGA ACTTGGCAGA GTACGGCGGC AAAACGGTGG AACAGCAGGT GGCCAGCGGC GAACTGGAAG TGGGCGCCAC CGTTCTGCCC GGCGATAGTG GGCTCGAACT CGCCACGCGA CAGTTTGCAA AGTATCCGAT CTGGGTGGTG GGACCGCGCA AAGCGAAATG GGCCAAAGGC AGGACCGTCA CCCTCACGGC ACTGCGCGAC GAACCGCTGC TATTGCTGGC CGAGGATTTC TCCCTGACGC GCAAGCTGCG ACAGGCCTTT CTCGAAGCCC GTATCGAGCC GCACATCGCT GCGCGGAGCG GGCATTGGGA ATTCCTCGCC TCGATGGCCG CTGCGGGACT GGGCACGACT TTTTTGCCGC AGCCGCTGGT GGCCAACCTC CCGAACCGTG ACAAGCTGGC CGTGGCACGC CTGACCGCCC CCGACATGGA TTGGGCGCTC GCGCACCTGT GGTCGCCCGG CCGCTACCTG TCGCACGCCG CTCGCGCGTG GCTCGCGACG TGCCAGGAAG TGCTCGGCGC CTGA
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Protein sequence | MPIDIRALRY FVETARLQSF TQAASSLSVT QSTISKMVRQ LENEVGQPLL IREGRQVRLT DVGRVVYARG QETLGVVHRL TLEVADLSSL GRGELTVGIP PMVNLFFSPV VSAFRQRYPN LVLNLAEYGG KTVEQQVASG ELEVGATVLP GDSGLELATR QFAKYPIWVV GPRKAKWAKG RTVTLTALRD EPLLLLAEDF SLTRKLRQAF LEARIEPHIA ARSGHWEFLA SMAAAGLGTT FLPQPLVANL PNRDKLAVAR LTAPDMDWAL AHLWSPGRYL SHAARAWLAT CQEVLGA
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