| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1400 |
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| Symbol | |
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| ID | 8019045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1478058 |
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| End bp | 1479605 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830179 |
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| Product | succinate CoA transferase |
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| Protein accession | YP_002981360 |
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| Protein GI | 241663000 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0427] Acetyl-CoA hydrolase |
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| TIGRFAM ID | [TIGR03458] succinate CoA transferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.428811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0306794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTG ATATTGGCGG CCGCATTCGC CTGCAATCCC TGCTCGATAA AGTGGTGTCT
GCGGACGAAG CTGCGACCCT GATCCACGAT GGCATGACGG TCGGCATGAG CGGTTTCACC
CGTGCCGGCG ACTGCAAGGC CGTGCCGTTT GCCCTGGCCC GGAGTGCCGC GCACGAGCCG
CTGCGCATTA CGCTCATGAC CGGCGCATCG CTGGGTAACG ACATTGACAA GGTATTGGCC
GAAGCCGATG TGATTGCCCG TCGCCTGCCG TTCCAGGCCG ATGCCACCCT TCGGCGCAAG
ATCAACGCAG GCGAGGTCAT GTTCATTGAC CAGCACTTGT CGGAAACCGT CGAGCAACTG
CGTTCGCGGC AGATTGCACC GCTGGATGTG GCGGTGGTCG AAGCCACCGC CATCACCGAG
AACGGCGGCA TCGTGCCGAC GACGTCGGTG GGCAACTCTG CAAGTTTCGC CGTGCTGGCG
AAGCAGGTGA TCGTCGAGAT CAACCTGAAC ATGCCCGCCA ATCTGGAAGG GCTGCACGAT
ATCTTCTTTC CGGTGCAGCG GCCCTATCGC CAGCCGATTC CACTCATTGC AGCGGAGCAG
CGCATCGGCC TGCCGTCTAT CCCGATCGAT CCGCGCAAGA TCGCTGCCAT CGTCATCACG
GGGCAGGACG ACAGCCCGTC CAACGTGTTG CCGCCCGATG CGGAGACCAA TGCCATCGCG
GGGCATCTGA ACGCATTCCT GGCGCGCGAG GTGCGCACGG GCCGTCTTTC GCCCACGCTG
CAGCCGCTGC AGGCGGGTAT CGGAACGATC TCCAACGCGG TCCTGCATGG CTTCATCGAC
TCGCCGTTCC ATGACCTCAA GATGTATTCG GAGGTTTTGC AGGACAGCTC CATCGAGCTG
CTCGACTCGG GCAAGCTGGC GTTTGCCTCG GCCTCGTCGA TCACGCTGTC ACGCCCGGTC
TACAAGCGGT TTCTGTCAGA ACTGGAACGC TACAAGACGC GGGTGATTCT GCGACCGCAG
GAGATCAGCA ACCACCCGGA AGTGATCCGC CGGTTGGGCC TGATCACCAT CAATACCGCG
CTGGAATGCG ATATCTACGG CAACGTGAAT TCGACGCACG TGGGCGGAAC GCACATGATG
AACGGCATCG GCGGCTCGGG CGACTTCGCG CGCAACGCGC ATCTGTCAGT CTTCGTGACC
AAGTCATTGG CCAAGGCCGG CGACATCTCG AGCATCGTGC CGATGGTCTC GCATGTGGAC
CATACCGAAC ACGACGTCGA CATCATCGTT ACCGAACATG GACTGGCCGA TCTGCGCGGG
TTGGCGCCGC GCGAGCGTGC TGTGCAGATC ATCAGCAACT GCGCTGATCC GCGCTACCGC
GAGCTGCTGC GCGACTACGT TGTGCGCGCG CAGCGGCGCG GCGGGCATAC GCCCCACCTC
CTGGAGGAGG CGCTGGCCTG GCATGTCCGG TTTCGCGACC AGGGCTCGAT GGCCTCAGCC
GGGCTCACAG GTGAAAGTCT GCTCCCGGAT CCCGCCCTCA GCGCTTGA
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| Protein sequence | MTSDIGGRIR LQSLLDKVVS ADEAATLIHD GMTVGMSGFT RAGDCKAVPF ALARSAAHEP
LRITLMTGAS LGNDIDKVLA EADVIARRLP FQADATLRRK INAGEVMFID QHLSETVEQL
RSRQIAPLDV AVVEATAITE NGGIVPTTSV GNSASFAVLA KQVIVEINLN MPANLEGLHD
IFFPVQRPYR QPIPLIAAEQ RIGLPSIPID PRKIAAIVIT GQDDSPSNVL PPDAETNAIA
GHLNAFLARE VRTGRLSPTL QPLQAGIGTI SNAVLHGFID SPFHDLKMYS EVLQDSSIEL
LDSGKLAFAS ASSITLSRPV YKRFLSELER YKTRVILRPQ EISNHPEVIR RLGLITINTA
LECDIYGNVN STHVGGTHMM NGIGGSGDFA RNAHLSVFVT KSLAKAGDIS SIVPMVSHVD
HTEHDVDIIV TEHGLADLRG LAPRERAVQI ISNCADPRYR ELLRDYVVRA QRRGGHTPHL
LEEALAWHVR FRDQGSMASA GLTGESLLPD PALSA
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