Gene Rpic12D_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1389 
Symbol 
ID8019034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1468299 
End bp1469126 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID644830168 
Producthypothetical protein 
Protein accessionYP_002981349 
Protein GI241662989 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000372272 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.274021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCC AGATCGAAAA AGCCCACGCT TTCCGCGCGC TGCACGAACG CAGCGGCACC 
TTTGTGATTC CCAACCCGTG GGACCCGGGC TCGGCCCGGC TGCTGGCATC GCTGGGCTTC
GAAGCATTGA CCAGCACCAG CGCAGGCTTC GCGTTCTCGC GCGGGATGCC TGACTATGGC
GTCGGCCGCG ACACCATCCT CGCGCACGTG GCCGACCTGG CAGCCGCCAC GGATGTGCCC
ATGGCTGCCG ACCTGGAAAA CGGCTTTGGC GATGCGCCGG AAGCCGTCGC CGAGACCATC
CGCCTGGCGG GCGCCACCGG CATCGTCGGC GGCTCGATTG AGGACGCGAC GGGCCGCGCA
GATGCGCCCA TTTACTCGCT GGAGGCTTCG GTCGACCGCG TGCGTGCTGC GGTGGAGGCT
GCGCGCGCGT TGCCGTTTCC ATTCACGTTC ACCGCGCGCG CCGAAAACCA CCTGCACGGT
CGCAACGACC TGGCCGACAC GATCCGCCGC CTGCAGGCCT TCCAGGACGC CGGCGCCGAC
GTGCTCTACG CCCCCGGCCT GAAAACACGC GACGAGATCG CCACCGTGCT GCGCGAGATC
GACCGCCCGC TCAACGTGCT GATGGGTTTT GCCGACGGCA ACTTGAGCGT GGCCGAGTTG
ACCGAATTGG GCGTCAAGCG CATCAGCGTA GGCGCGACGC TGGCACGCGT GGCCATGGGT
GCATTCCTGC GGGCGGCGGA AGAACTGCGC ACCGCCGGGA CGTTCAACTT TGCGCGCGAT
GCCGCCAGCG GAGCCAAGCT CAACGGCCTC TTTGCACCGT TCGCCTGA
 
Protein sequence
MPTQIEKAHA FRALHERSGT FVIPNPWDPG SARLLASLGF EALTSTSAGF AFSRGMPDYG 
VGRDTILAHV ADLAAATDVP MAADLENGFG DAPEAVAETI RLAGATGIVG GSIEDATGRA
DAPIYSLEAS VDRVRAAVEA ARALPFPFTF TARAENHLHG RNDLADTIRR LQAFQDAGAD
VLYAPGLKTR DEIATVLREI DRPLNVLMGF ADGNLSVAEL TELGVKRISV GATLARVAMG
AFLRAAEELR TAGTFNFARD AASGAKLNGL FAPFA