Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1381 |
Symbol | |
ID | 8019026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1461228 |
End bp | 1462172 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644830160 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002981341 |
Protein GI | 241662981 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.31695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGTG CTTTCTCAGC GGACTTGCCG TCCCGCATCC GCTTTCGCCA TCTGAGCTGC TTTGTCGCCA TCGCGCAGGA GCGCAATCTC CGGCGCGCCG CCGAGCGGTT GCATCTGAGC CAGCCGGCGG TGTCGAAAAC GCTCGGTGAG CTCGAGGCGC TGGCCGGCGT GCAGCTTGTC GAGCGTGGCC GGCAAGGCGC GCGGCTCACC GCGGCCGGCG AGCAATTCCT GCGGCATGCA GTGGGCGTGA CGCAGGCGCT GGAATCGGCC ACCGCCGCGC TGATGGGATC GACGGACGCA TCCGCGCCGG TCGTGCATGT GGGCGCCCTG CCGACGGTGG CCAGCAGCCT CCTGCCGCAG GCGATTGCCC GCCTGCACAC ACAGCGCCCG CATGCCGGCG TGCGGTTGCG CACCGGCACC AATGTCGAGT TGCTGACCGC GCTCAAGGCC GGCGAACTCG ATTTCATCGT CGGGCGCATG GCCGAGCCCG ACCGCATGCA GGGGCTGTCG TTCGAGTTGC TGTATGCAGA GCCGCTGGCG CTGGTCGTGC GGCCCGGACA TCCGCTGCTG ACGCTGCCGG GTGCATCCGC CTCGCTGCAG GCGGTGCTGG ATTACCCGCT CGTGATCGCC ACGCCTGGCA CGGTGCCCCG CCATCACACC GAAGCGCTGT TCCAGACGCA CGGGCTGCGC TTGCCGGCGG GCGTGACGGA AACGCTTTCG GTGTCCGTCG CACGGTTGCT GGCGTGCCGA TCCGATGCGG TGTGGATCAC CCCCGAGCGC GCAGCGGGCG ACGACATGGC GCATGGTCAA CTTGCCCGTC TGGATATTGC CACGTCGGGC ACCAAGGAAC CCGTCGGCCT GCTGCGCAGA AGCGCCGCCA CGCCCAGCGA ACTGGCCAGC GCGTTCATGG AACTGCTGAC CAAGCTGGCG CAGACGCCCG ATTGA
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Protein sequence | MESAFSADLP SRIRFRHLSC FVAIAQERNL RRAAERLHLS QPAVSKTLGE LEALAGVQLV ERGRQGARLT AAGEQFLRHA VGVTQALESA TAALMGSTDA SAPVVHVGAL PTVASSLLPQ AIARLHTQRP HAGVRLRTGT NVELLTALKA GELDFIVGRM AEPDRMQGLS FELLYAEPLA LVVRPGHPLL TLPGASASLQ AVLDYPLVIA TPGTVPRHHT EALFQTHGLR LPAGVTETLS VSVARLLACR SDAVWITPER AAGDDMAHGQ LARLDIATSG TKEPVGLLRR SAATPSELAS AFMELLTKLA QTPD
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