Gene Rpic12D_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1377 
Symbol 
ID8019022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1457866 
End bp1458636 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID644830157 
Productprotein of unknown function DUF899 thioredoxin family protein 
Protein accessionYP_002981338 
Protein GI241662978 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.349929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA CACACCCCAC AGCCACCCGC GCAACCTGGC TGGCAGAGCG CATTGAACTG 
CTCAAGGCCG AGAAGGAACT CACGCGCCGC AGCGATGAAC TCGCGCGCCG CCGGCAGGCA
CTGCCGTGGG TTCGCATCGA CAAAAGCTAT CGCTTTGAAA CCGAGAACGG CAGCGCCTCG
CTGGTCGATC TGTTTGGCGG ACGTTCGCAA CTGCTGGTCT ATCACTTCAT GTTCGGGCCG
GACTACAAGG CGGGCTGCCC ATCGTGCTCG ATGATTGCCG ATGACTTCGA TGGCTTTGTC
ACGCATCTGG CGAACCACGA CGTGACGCTG ATGGCGGTGT CGCGCGGGCC ACTGGCCAAG
CTGCTGGAGT ACCGGGAGCG GATGGGCTGG AGCTTCCCGT GGGCGTCGTC GGTGGGCAGC
GATTTCAACT ACGACTTCAA CGTCTCGATC ACGGAAGACC AGCAGCGCGC CGGCAGCGCC
GACTACAACT ACGTGCGCGG CAGCCACGTG ATGGATGCAT CCGACTTGCC CGAACCCGTG
CAGCAGTTCG CCAGCATGTG CGGCACCGAT GCGCCCACCT ACGTGCGCGA CCGGCCCGGC
ATGAGCGCGT TCGTGCTGGA AGATGGCGTC GTCTATCACA CGTATTCGAC CTACGCGCGC
GGGCTCGACG GCTTGTGGGG CGCATACCAG TGGCTGGACC GCGCGCCACT GGGCCGCAAC
GAAACCGGTG TCTGGTGGCG TCGCCATGAC GAATACGCTC AGCAGCGTTG A
 
Protein sequence
MSATHPTATR ATWLAERIEL LKAEKELTRR SDELARRRQA LPWVRIDKSY RFETENGSAS 
LVDLFGGRSQ LLVYHFMFGP DYKAGCPSCS MIADDFDGFV THLANHDVTL MAVSRGPLAK
LLEYRERMGW SFPWASSVGS DFNYDFNVSI TEDQQRAGSA DYNYVRGSHV MDASDLPEPV
QQFASMCGTD APTYVRDRPG MSAFVLEDGV VYHTYSTYAR GLDGLWGAYQ WLDRAPLGRN
ETGVWWRRHD EYAQQR