Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1340 |
Symbol | |
ID | 8018985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1419249 |
End bp | 1421837 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830120 |
Product | PII uridylyl-transferase |
Protein accession | YP_002981301 |
Protein GI | 241662941 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.423567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCCG CTGCCGCCGT CCCTGCCGAA GAAACTCATC CGCGCGACGC CCTGAAAGCT GAGCGCGCGC ACCTGTTCGC GCAGTTCGAC CAGCACGCCA ACGTTCAGCA ACTTGTGACC AAGCTGGCGC GCGCGGTGGA CCGTGCGCTC GTGCGTCTTT GGCAGGAAGA GCAGATGCCC ACCACCTGCG CGCTGATTGC CGTGGGCGGC TACGGGCGCG GCGAGCTGTT TCCGCATTCC GATGTGGACA TCCTCCTGTT GCTGCCAGGC ACCGCAGACA AGGCTTTGGA GGCCCGGCTG GAGGCCTTCA TCGGCCGCTG CTGGGACATG GGGCTGGACA TCGGCTCCTC GGTGCGCACG GTCGACGAGT GCATCAAGGA AGCCGCACAA GACGTAACAG TACGCACGTC GCTGCTGGAA GCGCGTCTGC TGACGGGCGA CGAAGGGTTA TACCGCACGT TCGAGACGCA CTATCAAGGC CATCTGGACG CCGCAGACTT CTTCCAGTCG AAACTGCTGG AAATGCGCCA GCGGCACGCC AAGTACCAGG ACACGCCCTA CTCGCTCGAA CCGAACTGCA AGGAAAGCCC CGGCGGCCTG CGCGACCTGC AGGTCATTCT GTGGATGACG CGCGCGGCTG GTTTCGGCTC CAGCTGGAAC GAGCTGCTCG CCAATGGCCT GCTGACGCGC CGTGAAGCGC AGGAGCTGGC CAGCAACGAG CGCTTGCTCA AAACCGTGCG CGCGCGTCTG CACCTGCTGG CCGGACGTCG CCAGGACGTT TTGGTGTTCG ACCTCCAGAC GCAGCTGGCC GAATCGTTCG GATACCGCCC GACCACCGCC AAGCGCGCGA GCGAACAGCT CATGCGCCGC TATTACTGGG TGGCCAAGGC GGTCACGCAG CTCAATACCG TGGTGCTGCA GAACATCGAG GCACGGCTGT TCCCGAGCGA GCTGGGTATC ACGCGGCGGA TCAACGATCG CTTTGTCGAA CGGCAGGGCA TGCTCGAGAT TGCCGACGCC GATCTCTACC AGCGCGAGCC GACCGCCATC CTGGAAACGT TCCTGCTTTA CGAGCAGACG CGCGGCATCA AGGGATTGGC AGCCAGCACG ATGCGCGCGC TCTACAACGC GCGGACGTTG ATGGACGCCA AATGGCGCAA GGATCCGGCC AATCGCGCGC TGTTCCTGTC GATCCTGCAA CAGCCGCAGG GCATCACGCA CGCGCTGCGC CTGATGAACC AGACCAGCGT GCTCGGCCGC TACCTGGTCA ACTTCCGCCG CATCGTCGGG CAGATGCAGC ACGACCTGTT CCACGTCTAC ACGGTCGATC AGCACATCTT GATGGTGGTG CGCAATATCC GCCGTTTCGC CATCGTCGAG CACACGCACG AGTTTCCGTT CTGCAGCCAG TTGATGGCGA ACTTCGACAA GCCGTGGGTG CTGACCGTGG CCGCGCTGTT CCATGACATT GCGAAAGGAC GCGGCGGTGA TCACTCCGTG CTCGGCATGT CCGACGCACG GCGCTTCTGC AAGGAACACG GCATCGCCAA GCAAGACGCA GACTTGATCG TCTGGCTTGT CGAGCATCAC CTGACGATGA GCCAGGTCGC GCAGAAGCAG GACCTCGGCG ATCCCGAAGT CATCCGCCAT TTTGCCGATC TGGTCGGCAC CGAGCGTCGG CTGACCGCGC TGTATCTGCT GACCGTTGCC GACATCCGCG GCACCAGCCC CAAGGTGTGG AACGCCTGGA AGGGCAAGCT GCTGGAAGAC CTGTATCGCA TGACGCTGCG CGTGCTCGGC GGCGCCACCA CGGACCCGCA CGCCGTGCTC GAAGGCCGCA AGGAAGAAGC GCGCGCCCTG CTGCGCCTGG CCGCGCTGGA CGACACTGCA CACGAGGCAC TGTGGAAACA GCTCGACGTG GGCGTGTTCC TGCGCCACGA CGCGCGCGAC ATCGCCTGGT TCACGCGGCA TTTCTACAAC CGTGTCGACA CGACGATTCC CATCGTGCGA GCACGCATTT CACCAGCGGG CGTCGGCCTG CAGGTGGCGG TGTACTCGCC GGATCGGCCC GATCTTTTTG CGCGCATCTG CGGCTACTTC GAGCGCAAGA GCCTGACGAT TCTGGACGCC AAGATCCACA CCACCAAACA CGGCTACGCG CTCGACACCT TCCAGGTGGC CGATCCCGGC AGCGGCCTGG TGGAGCCCGG CCATTACCGC GACATCATCA CGCTGGTCGA GCACGAACTC GCCGAGCAGA TCTCGCGCGA AACCGCCCTG CCCGAGCCGC CGCGTGGGCG CATCTCGCGC CAGTCGCGCA GCTTCCCGAT CAAGCCGCGC GTCGACCTGC GGGCGGACGA GCGCGGCCAG TATTACCTGC TGTCCATTTC TGCAACAGAC CGCACCGGTC TGCTCTACGC CATTGCCCGC GTGCTCGCAC ACCGCCGCGT GTCGGTGCAC ACCGCGCGCA TCAACACGCT CGGCGAGCGC GTGGAAGATA TCTTCCTGGT CGACGGGACC CGTCTGACCC AGGACAACAA ACTGCAGCTC GAGCTTGAAA GCGAGCTGCT TGATGCGCTC GCCATCTGA
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Protein sequence | MPSAAAVPAE ETHPRDALKA ERAHLFAQFD QHANVQQLVT KLARAVDRAL VRLWQEEQMP TTCALIAVGG YGRGELFPHS DVDILLLLPG TADKALEARL EAFIGRCWDM GLDIGSSVRT VDECIKEAAQ DVTVRTSLLE ARLLTGDEGL YRTFETHYQG HLDAADFFQS KLLEMRQRHA KYQDTPYSLE PNCKESPGGL RDLQVILWMT RAAGFGSSWN ELLANGLLTR REAQELASNE RLLKTVRARL HLLAGRRQDV LVFDLQTQLA ESFGYRPTTA KRASEQLMRR YYWVAKAVTQ LNTVVLQNIE ARLFPSELGI TRRINDRFVE RQGMLEIADA DLYQREPTAI LETFLLYEQT RGIKGLAAST MRALYNARTL MDAKWRKDPA NRALFLSILQ QPQGITHALR LMNQTSVLGR YLVNFRRIVG QMQHDLFHVY TVDQHILMVV RNIRRFAIVE HTHEFPFCSQ LMANFDKPWV LTVAALFHDI AKGRGGDHSV LGMSDARRFC KEHGIAKQDA DLIVWLVEHH LTMSQVAQKQ DLGDPEVIRH FADLVGTERR LTALYLLTVA DIRGTSPKVW NAWKGKLLED LYRMTLRVLG GATTDPHAVL EGRKEEARAL LRLAALDDTA HEALWKQLDV GVFLRHDARD IAWFTRHFYN RVDTTIPIVR ARISPAGVGL QVAVYSPDRP DLFARICGYF ERKSLTILDA KIHTTKHGYA LDTFQVADPG SGLVEPGHYR DIITLVEHEL AEQISRETAL PEPPRGRISR QSRSFPIKPR VDLRADERGQ YYLLSISATD RTGLLYAIAR VLAHRRVSVH TARINTLGER VEDIFLVDGT RLTQDNKLQL ELESELLDAL AI
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