| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1318 |
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| Symbol | |
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| ID | 8018963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1392208 |
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| End bp | 1394097 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830098 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_002981279 |
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| Protein GI | 241662919 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0144402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCAA CCAAACAGCC CGGCTCCAAC AGCGTCATTG CCATGCCCGA CCAGCGTGTC
GTGCAGGTGC AAGACCTGAG CGTGCGCTTT GCCACGTCCG AGCGCGTGGT CGACGCGGTG
CGCAACCTGT CGTTCCACGT CGACCGGGGC GAGACGCTGG CCGTGGTCGG CGAATCGGGT
TCGGGCAAGT CGGTGACGTC GCTGGCGCTG ATGCGGCTGG TGGAACATGG CGGCGGCAAG
ATCATCGGCG GCCAAATCCA TCTGCGCCGC CGCAACGGCG AGGTGCTGGA CTTGGCGAAC
GCCAGCCCGG CGGCCATGCG CGGCGTGCGC GGTGCCGACA TCGCGATGAT CTTCCAGGAG
CCGATGACCT CGCTCAACCC GGTCTTCACC GTGGGCGAGC AGATTGCCGA GTCGATCCGC
CTGCACCAGG GCAAGCCCGC CAGCGAGGCC AAGGCCGAGG CGCTGCGCAT GCTGGAGCTG
GTGCGCATTC CGGAAGCGCG CAATGTGCTG GGGCGCTATC CGCACCAACT GTCGGGCGGC
ATGCGCCAGC GCGTGATGAT TGCGATGGCG CTGTCATGTA AGCCGTCGTT GCTGATTGCG
GATGAGCCGA CCACCGCGCT GGACGTGACC ATCCAGGCGG AAATCCTGCA ACTGATCCGC
GCGCTGCAGC AGGAGCTGCA GATGGCCGTG GTGTTCATCA CGCATGACAT GGGTGTGGTG
GCGGAAGTGG CCGACCGCGT GCTCGTGATG TACAAGGGCG ATCGCGTGGA AGAGGGCCCG
TCGGCCACCG TGTTTGCACA GCCGGCGCAT CCGTATACGC GTGCGCTGCT GTCGGCGGTG
CCGCGCCTGG GTTCGATGCA GGGCACCGAT GGCCCGGCGC GCTTTCCGCT GTTGCGTGTG
GATGGCACGT CCGCTGCGGT CGATACGACA CCGCAGCCGG CAGCGTCGCA CGATGTGCAA
CCCATTTTGC GTGTGCGTGA TCTCGTCACG CGCTTTGACG TGCCTACGGG CATCTTCGGC
CGCGTTACGC GCCGGGTGCA TGCGGTGGAG CAGGTCAGTT TCGATCTCTA CCCTGGTGAG
ACGCTGGCGC TGGTCGGCGA ATCGGGCTGC GGCAAGTCGA CGACGGGACG GTCGCTCTTG
CGCCTGGTGG ACAGCCAGAG CGGCAGCATC GAATTTGCCG GCCAAAACAT CGGCGAGCTG
AAGGGGCCGG CGCTCCAGAC GCTTCGCCGA AACATCCAGT TCATCTTCCA GGACCCATTC
GCCTCGCTGG ACCCGCGCGT GCCGGTCGGC TACTCCATCA TGGAGCCGCT GCTGGTGCAC
AAGGTGGCTT CCGGCAAAGA GGCACAGCAA CGCGTGGAAT GGCTGCTGGA CAAGGTGGGC
CTGCAGGCCG CGCATGCATC GCGCTATCCG CACGAGTTCT CGGGCGGGCA GCGCCAGCGC
ATCTGCATTG CGCGCGCGCT GGCATTGAAC CCGAAGGTGG TGATTGCGGA TGAGTCGGTG
TCCGCGCTCG ACGTGTCGAT CCAGGCGCAG ATCGTCAACC TGATGCTCGA CCTGCAGAAG
GAGTTTGGCG TTGCGTTCCT GTTCATCTCA CACGACATGG CGGTGGTGGA GCGCATCAGC
CATCGCGTGG CGGTGATGTA TCTCGGCCAG ATCGTCGAGA TCGGCCCGCG CCGTGCGATC
TTCGAGAACC CGCAGCACCC CTATACGAAG AAGCTGATGT CGGCCGTGCC GATTGCGGAC
CCGGCGCGCC GTCACCTGAA GCGTGAACTG TCGACGCACG AAATTCCAAG CCCGATCCGC
GCCATTGGCG ACCTGCCGGT GGTGCAGCCG TTGGTGCAAG TGGCGCCAGA CCACTTTGTT
GCCCGCCACT CGATTGGCGG CGCGTATTAA
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| Protein sequence | MTATKQPGSN SVIAMPDQRV VQVQDLSVRF ATSERVVDAV RNLSFHVDRG ETLAVVGESG
SGKSVTSLAL MRLVEHGGGK IIGGQIHLRR RNGEVLDLAN ASPAAMRGVR GADIAMIFQE
PMTSLNPVFT VGEQIAESIR LHQGKPASEA KAEALRMLEL VRIPEARNVL GRYPHQLSGG
MRQRVMIAMA LSCKPSLLIA DEPTTALDVT IQAEILQLIR ALQQELQMAV VFITHDMGVV
AEVADRVLVM YKGDRVEEGP SATVFAQPAH PYTRALLSAV PRLGSMQGTD GPARFPLLRV
DGTSAAVDTT PQPAASHDVQ PILRVRDLVT RFDVPTGIFG RVTRRVHAVE QVSFDLYPGE
TLALVGESGC GKSTTGRSLL RLVDSQSGSI EFAGQNIGEL KGPALQTLRR NIQFIFQDPF
ASLDPRVPVG YSIMEPLLVH KVASGKEAQQ RVEWLLDKVG LQAAHASRYP HEFSGGQRQR
ICIARALALN PKVVIADESV SALDVSIQAQ IVNLMLDLQK EFGVAFLFIS HDMAVVERIS
HRVAVMYLGQ IVEIGPRRAI FENPQHPYTK KLMSAVPIAD PARRHLKREL STHEIPSPIR
AIGDLPVVQP LVQVAPDHFV ARHSIGGAY
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