Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1310 |
Symbol | alr |
ID | 8018955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1383210 |
End bp | 1384334 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644830090 |
Product | alanine racemase |
Protein accession | YP_002981271 |
Protein GI | 241662911 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.183193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGAC CCATCCAGGC CGTCATCCAC GGCCCAGCAC TTGCCAATAA TCTCCAGGTT GCCCGCCGTC ATGCGCCCAA CTCGCGCGTG TGGGCTGTCG TCAAAGCCAA CGCGTACGGT CACGGCATCG AACGCGTGTA TGAAGGCCTG CGCCAGACCG ACGGTTTCGG CCTGCTCGAT CTGGACGAGG CCGTCCGACT GCGCCAACTC GGCTGGCAGG GGCCGGTCCT CCTGCTCGAA GGCTTTTTCA AGCCGGAAGA CCTGGCCATC GTCGAGCAGT TCCGCCTGAC CACCACCGTC CACTGCGAAG AGCAGCTTCG CATGCTCGAA CTGGCCCGCC CGAAAGGACC CATCAGCGTG CAGCTCAAGA TCAATACGGG CATGAGCCGC CTCGGCTTCG CGCCCGCTGC CTACCGCGCC GCATGGGAGC GCGCCCGCGC CATTTCGGGC GTCGGCACGA TCGTCCACAT GACGCATTTT TCGGATGCCG ACGGCCCGCG CGGCATCGAG CATCAACTTG TCGCGTTTGA ACAGGCCACG CAGGGTTTGC CGGGCGAGGC GTCGCTGTGC AACTCCGCGG CAACGCTGTG GCATCCGAAA GCACATCGCG ACTGGGTGCG CCCCGGCGTG ATCATGTACG GCGCATCGCC GACGGGCGTG GCGGCGGACA TCGACGGCAC GGGGCTGATG CCCGCCATGA CGCTCAAGAG CGAGCTGATC GCCATTCAGG ATCTGCAGCC CGGGGCGACG ATCGGTTACG GCTCGCGCTT TACCGTGGAG CACCCGATGC GCATCGGCAT CGTCGCGTGC GGTTATGCCG ACGGCTACCC GCGCCATGCG CCAGGTTGGG ACGGCAACCA CACGCCGGTG CTGGTGGACG GCGTGCGCAC GCACATCGTG GGCCGCGTGT CGATGGACAT GATTACCGTT GACCTGGCCG GGGTGCCCGA GGCGCGTGTC GGCACGCCTG TCACCCTGTG GGGCGAGGGC CTGCCGATCG ACGACGTTGC TCACGCTTCG GGCACGGTCG GGTATGAGCT GATGTGCGCC CTGGCGCCCC GCGTACCGGT GTCGGTCGAG CCCGTCAGCA CCGCGGACGC CGGCGACCTG GGCAAGGCTG CCTGA
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Protein sequence | MPRPIQAVIH GPALANNLQV ARRHAPNSRV WAVVKANAYG HGIERVYEGL RQTDGFGLLD LDEAVRLRQL GWQGPVLLLE GFFKPEDLAI VEQFRLTTTV HCEEQLRMLE LARPKGPISV QLKINTGMSR LGFAPAAYRA AWERARAISG VGTIVHMTHF SDADGPRGIE HQLVAFEQAT QGLPGEASLC NSAATLWHPK AHRDWVRPGV IMYGASPTGV AADIDGTGLM PAMTLKSELI AIQDLQPGAT IGYGSRFTVE HPMRIGIVAC GYADGYPRHA PGWDGNHTPV LVDGVRTHIV GRVSMDMITV DLAGVPEARV GTPVTLWGEG LPIDDVAHAS GTVGYELMCA LAPRVPVSVE PVSTADAGDL GKAA
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