| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1309 |
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| Symbol | |
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| ID | 8018954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1381249 |
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| End bp | 1382628 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644830089 |
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| Product | lysophospholipid transporter LplT |
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| Protein accession | YP_002981270 |
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| Protein GI | 241662910 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00718572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.641684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGG CAGGTCGTGA AGAGGAAGAT GGCACCGCGG TCTACGGGGA CGAATTCGAA
GGTATGAAGA AGGGTTTTTA CACCATCATG GCGGCGCAGT TTTTTTCGTC GCTCGCTGAC
AATGCGCTGC TCATTGCCGC CATCGCCCTT CTGACAGAGA TGCATGCGCC GCAGTGGATG
ACCCCGCTGC TCAAGCTGTT CTTCGTGCTC TCTTACGTTT TACTTGCCGC GTTCGTCGGC
GCGTTTGCCG ATTCCCGGCC CAAGGGCAAG GTGATGCTCA TCACCAATGC CATCAAGCTG
GTCGGTTGTG GCGTGATGCT CACCGGCCTG CATCCGCTGC TCGCCTATGG CGTGGTCGGC
TTTGGTGCGG CGGCGTATTC TCCGGCTAAG TACGGCATCC TTACCGAGCT TCTTCCGCCT
GAAAAACTCG TCGCCGCCAA TGGATGGATC GAAGGCCTGA CCGTCGGCTC GATCATCCTC
GGCACCGTGC TAGGTGGGGC GCTCATCTCC AACCATGTGT CGGCCTGGCT GCTGTCGTTC
GACATTCCCG GGCTCGAGCG CATCGACACG CCGGCTGAAG CGGCGATGCT GGTGATCATG
GTGATCTACC TGATCGCGGC GCTGTTCAAC ACCCGCATTC CCGATACCGG CGCGCGCTAT
CCGCAGCAGG AAAAGAACCC GGTACGTCTC ATTTCGGAGT TTGCCGACTG CTTCAACGCG
CTGTGGCGCG ACAGGCTCGG CCAGATCTCC CTGGCGGTGA CAACGCTGTT CTGGGGCGCA
GGCGCCACGC TGCAATTCAT CGTGCTGAAG TGGGCCGAGC AATCGCTGGA GCTGAACCTC
TCGCAGGGCG CCATTCTGCA GGCCGTGGTG GCCGTGGGCG TGGCCGCCGG TGCCATGGCT
GCCGCCGTGA AAATTCCGCT GCGCCGCTCG CTCGACGTGC TGCCGGTGGG CGTGGCAATG
GGCGCAGTTG TGATGCTGAT GGCGTTCTAC ACCAAGCACA CGATCCCGGA AGTCACATTC
CACATCGGCA ACATGAAGCT GCCGCTGTAC ATGATGATCG CCTACCTGTT CCTGATGATC
GTGGGCGCCA TGTCGGGCTT TTTCGTGGTG CCGATGAACG CGCTGCTGCA GCACCGCGGG
CATGTGCTGC TCTCGGCCGG CCACTCGATT GCGGTGCAGA ACTTCAACGA GAATGTCTCC
GTGCTGCTGA TGCTGTGCCT GTATGCGCTG CTCATCAAGC TCAATGTGTC GGTGGGCGTG
GTGATCGTGT CGTTCGGCAT CTTCGTCTGC CTGACGATGG CGCTGGTCAT GCGCCGGCAT
CGCCTCAACG AAAAGCTGTT TCACACCGCC GCGCTCATCG GCGAAGACAA GCACCACTGA
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| Protein sequence | MLPAGREEED GTAVYGDEFE GMKKGFYTIM AAQFFSSLAD NALLIAAIAL LTEMHAPQWM
TPLLKLFFVL SYVLLAAFVG AFADSRPKGK VMLITNAIKL VGCGVMLTGL HPLLAYGVVG
FGAAAYSPAK YGILTELLPP EKLVAANGWI EGLTVGSIIL GTVLGGALIS NHVSAWLLSF
DIPGLERIDT PAEAAMLVIM VIYLIAALFN TRIPDTGARY PQQEKNPVRL ISEFADCFNA
LWRDRLGQIS LAVTTLFWGA GATLQFIVLK WAEQSLELNL SQGAILQAVV AVGVAAGAMA
AAVKIPLRRS LDVLPVGVAM GAVVMLMAFY TKHTIPEVTF HIGNMKLPLY MMIAYLFLMI
VGAMSGFFVV PMNALLQHRG HVLLSAGHSI AVQNFNENVS VLLMLCLYAL LIKLNVSVGV
VIVSFGIFVC LTMALVMRRH RLNEKLFHTA ALIGEDKHH
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