Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1296 |
Symbol | |
ID | 8018941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1369191 |
End bp | 1369892 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644830076 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002981257 |
Protein GI | 241662897 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.032312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.299541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAC CCGCACGGGA ACCTGCCGAC AGCCAACCGG CCGCCGAACC GATCTACCAG GGCCTGCTGA CGGCCATCAT GGAGCACCGA CTGCCGGCCG GCACCAAGCT GGTCGAAGAA CGGCTGTGCG AAGCGACCGG CGCCGGCCGG CCGCGCATCC GCCAGGTGCT GGCGCGTCTG GCGCATGAGC ATCTGGTGAC CCTCGTGCCG AACAAGGGCG CGTTCGTCGC GCAGCCTTCC GTGAAAGAGG CGCGCGACGT TTTCCAGACC CGCCGCATCA TCGAACCCGA ACTGGCCAGC ATGCTGGCAA ACGCGTGCAC GCCGGCAAAG GCCAAGCGCC TGCGCGAACA CATCGCGGCA GAACACGCCG CGCGCGAACG CGGCGATCGG GCGGCCACCA TCCGTCTATC GGGCGAATAT CACGTCCTCA TTGCCGAGAT GGCCGGCAAC CATGTGCTGG AACGGCTGAC GCGCGAGGCG GTGTCGCGCA CGTGCCTGAT CATCACGCTC TATGACCGCC CCGGCCTGCC CGCCTGCCCC GAGCACGAGC ACGACACCCT GACCGAAGCG ATCGCTACCG GCGATGCCGC GCGTGCGCAC GACCTGATGC GCGAGCATCT GGAGCACATC GAGCACTCGC TCGACCTCCA TGCGACACCC ACGTCGGCGC TGGATCTGGA ATCGATCTTC AAGCGCGCCT GA
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Protein sequence | MPAPAREPAD SQPAAEPIYQ GLLTAIMEHR LPAGTKLVEE RLCEATGAGR PRIRQVLARL AHEHLVTLVP NKGAFVAQPS VKEARDVFQT RRIIEPELAS MLANACTPAK AKRLREHIAA EHAARERGDR AATIRLSGEY HVLIAEMAGN HVLERLTREA VSRTCLIITL YDRPGLPACP EHEHDTLTEA IATGDAARAH DLMREHLEHI EHSLDLHATP TSALDLESIF KRA
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