Gene Rpic12D_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1296 
Symbol 
ID8018941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1369191 
End bp1369892 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID644830076 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002981257 
Protein GI241662897 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.032312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.299541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAC CCGCACGGGA ACCTGCCGAC AGCCAACCGG CCGCCGAACC GATCTACCAG 
GGCCTGCTGA CGGCCATCAT GGAGCACCGA CTGCCGGCCG GCACCAAGCT GGTCGAAGAA
CGGCTGTGCG AAGCGACCGG CGCCGGCCGG CCGCGCATCC GCCAGGTGCT GGCGCGTCTG
GCGCATGAGC ATCTGGTGAC CCTCGTGCCG AACAAGGGCG CGTTCGTCGC GCAGCCTTCC
GTGAAAGAGG CGCGCGACGT TTTCCAGACC CGCCGCATCA TCGAACCCGA ACTGGCCAGC
ATGCTGGCAA ACGCGTGCAC GCCGGCAAAG GCCAAGCGCC TGCGCGAACA CATCGCGGCA
GAACACGCCG CGCGCGAACG CGGCGATCGG GCGGCCACCA TCCGTCTATC GGGCGAATAT
CACGTCCTCA TTGCCGAGAT GGCCGGCAAC CATGTGCTGG AACGGCTGAC GCGCGAGGCG
GTGTCGCGCA CGTGCCTGAT CATCACGCTC TATGACCGCC CCGGCCTGCC CGCCTGCCCC
GAGCACGAGC ACGACACCCT GACCGAAGCG ATCGCTACCG GCGATGCCGC GCGTGCGCAC
GACCTGATGC GCGAGCATCT GGAGCACATC GAGCACTCGC TCGACCTCCA TGCGACACCC
ACGTCGGCGC TGGATCTGGA ATCGATCTTC AAGCGCGCCT GA
 
Protein sequence
MPAPAREPAD SQPAAEPIYQ GLLTAIMEHR LPAGTKLVEE RLCEATGAGR PRIRQVLARL 
AHEHLVTLVP NKGAFVAQPS VKEARDVFQT RRIIEPELAS MLANACTPAK AKRLREHIAA
EHAARERGDR AATIRLSGEY HVLIAEMAGN HVLERLTREA VSRTCLIITL YDRPGLPACP
EHEHDTLTEA IATGDAARAH DLMREHLEHI EHSLDLHATP TSALDLESIF KRA