Gene Rpic12D_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1286 
Symbol 
ID8018931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1359331 
End bp1360440 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content66% 
IMG OID644830066 
Productsulfate ABC transporter, ATPase subunit 
Protein accessionYP_002981247 
Protein GI241662887 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1118] ABC-type sulfate/molybdate transport systems, ATPase component 
TIGRFAM ID[TIGR00968] sulfate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.245798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.231745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC AGGTTCAACA CATCACCAAG CGCTTCGGCA ATTTCGTTGC CCTCAACGAT 
GTCTCGCTCG ACTTCAAGCA GGGCGAACTG ACTGCGCTGC TGGGGCCGTC GGGCTGCGGC
AAGACCACGC TGCTGCGCAT CATCGCGGGC CTGGAGCATG CCGATTCGGG CACGATTCAA
CTCAACGGCG AAGACGCATC GGACCAGCAT GTGCGCGAGC GCCAGGTCGG CTTCGTGTTT
CAGCACTACG CGCTGTTCAA GCACATGACG GTGTTCGAGA ACGTGGCCTT TGGCCTGCGT
GTGAAACCCC GCGCGCAGCG GCCGAGTGAA GCGCAGATCC GCGCGAAGGT GAAGGAACTG
CTGGAACTGG TGCAGCTTGA TTGGCTGGCT GATCGCTACC CGCCGCAGCT CTCGGGCGGA
CAGCGCCAGC GGATCGCCTT GGCGCGTGCG TTGGCGGTGG AGCCGCGCGT GCTGCTGCTC
GACGAGCCGT TCGGCGCGCT CGATGCCAAG GTGCGCAAGG AACTGCGACG CTGGCTGCGC
CGCCTGCACG ACGATCTGCA TGTCACGAGC CTGTTTGTCA CGCACGACCA GGAAGAGGCG
CTGGAAGTGG CCGACAACGT GGTGCTGATG AACCGCGGCC AGGTGGAGCA GGTCGGCAGC
CCAGATGCGG TCTACAACAC GCCGGCCACG CCGTTCGTCT ACGGCTTCCT CGGCAACGTG
AACCTGTTCC ACGGCCGCCT GGAAGAGGGC GAGGGCGGCA GCGTGCTGCA CGTGGGCGAT
TCGGCCATCG CCGTGCCGTC GGGCGGGGTG GATTCGTCCC GCGCCGATCA GGCGGTGGCT
TTCGTGCGCC CGCACGAGAT CGACCTGGAG CGCTATGCGC CGGGCGCCGA GGGCATTCCC
GTGACGCTGC GCCGTGCGCT CACGCTGGGC GCCATCGCAC AGCTTGAGCT GGAGCGCGAA
GACACCGACG ACATCATCGA AGTCTCCCTG CCCATCGAGC GCTTTCGCGC CGAGGGCTTC
CGTGAAGGCG AAACGCTGGT GGTGCGCCCG CGCGCGATCC GCGTGTTCGC GCAAGGCAAT
GCACGGCCCG TCGCGCAAGC CGCCGTGTAA
 
Protein sequence
MSIQVQHITK RFGNFVALND VSLDFKQGEL TALLGPSGCG KTTLLRIIAG LEHADSGTIQ 
LNGEDASDQH VRERQVGFVF QHYALFKHMT VFENVAFGLR VKPRAQRPSE AQIRAKVKEL
LELVQLDWLA DRYPPQLSGG QRQRIALARA LAVEPRVLLL DEPFGALDAK VRKELRRWLR
RLHDDLHVTS LFVTHDQEEA LEVADNVVLM NRGQVEQVGS PDAVYNTPAT PFVYGFLGNV
NLFHGRLEEG EGGSVLHVGD SAIAVPSGGV DSSRADQAVA FVRPHEIDLE RYAPGAEGIP
VTLRRALTLG AIAQLELERE DTDDIIEVSL PIERFRAEGF REGETLVVRP RAIRVFAQGN
ARPVAQAAV