| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1284 |
|---|
| Symbol | |
|---|
| ID | 8018929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1357432 |
|---|
| End bp | 1358346 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644830064 |
|---|
| Product | sulfate ABC transporter, inner membrane subunit CysT |
|---|
| Protein accession | YP_002981245 |
|---|
| Protein GI | 241662885 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0555] ABC-type sulfate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0176575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.203445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGT CTTCCGCGTT TTCTCTCCCC AAGCGGCGTA AGCCCGCCAA CGTGCTCCCG
GGGTTCGGGC TGGCGCTGGG GTTCTCGCTC CTATACCTCG CGCTGATCGT CCTGATCCCG
CTGTCGGCAA CCGTCCTCAA GACGTTCACC ATGACGTGGG ATGCGTTCTG GACGACCGTC
ACCGCGCCGC GCGTGGTGGC GTCGTACAAG CTGACCTTTG GCGCATCGCT GATCGCTGCG
GTAATCAACC TTGTCTTCGG GCTGATCGTG GCGTGGGTGC TGGTGCGCTA TCGCTTTCCG
GGCAAGCGGT TGATCGATGC GCTGGTGGAT CTGCCGTTTG CGCTGCCGAC GGCCGTGGCT
GGTATCGCGC TGACCGCGTT GTATGCACCG AATGGCTGGA TTGGCTCGCG GCTGGAACCG
CTGGGGCTGA AGGTCGCGTT CACACCGCTG GGCATCGTGG TAGCGCTCAC GTTCATCGGC
TTGCCGTTTG TCGTGCGCAC GGTGCAGCCG GTGCTCGAAG ATCTGGAGAC CGAACTGGAA
GAGGCGGCTG CCAGCCTGGG TGCCACGCGC TGGCAGACCT TCATTCGCGT GATCCTGCCG
ACCTTGCTGC CTGCATTGCT GACCGGTTTC GCGCTGGCGT TTGCGCGTGC CACGGGCGAG
TACGGCTCGG TCATCTTCAT CGCCGGCAAC ATGCCGATGG TCTCCGAGAT CACGCCGCTC
ATGATCTATT CGAAGCTTGA GCAGTTCGAC TACGCGGGCG CCACGGCCAT TGCCGTCGTC
ATGCTCGGCA TCTCGTTCAC GCTGCTGCTG GTGATCAACC TGCTGCAAGC CTGGACGCGC
CGCCGCGGCA ATCGAAACGA CACCATCGAA CGCGCCCCTG AACCTTCGAC CGCCCACGCG
GCAGCTGGAG CCTGA
|
|---|
| Protein sequence | MSLSSAFSLP KRRKPANVLP GFGLALGFSL LYLALIVLIP LSATVLKTFT MTWDAFWTTV
TAPRVVASYK LTFGASLIAA VINLVFGLIV AWVLVRYRFP GKRLIDALVD LPFALPTAVA
GIALTALYAP NGWIGSRLEP LGLKVAFTPL GIVVALTFIG LPFVVRTVQP VLEDLETELE
EAAASLGATR WQTFIRVILP TLLPALLTGF ALAFARATGE YGSVIFIAGN MPMVSEITPL
MIYSKLEQFD YAGATAIAVV MLGISFTLLL VINLLQAWTR RRGNRNDTIE RAPEPSTAHA
AAGA
|
|---|
| |