| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1276 |
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| Symbol | |
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| ID | 8018921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1350489 |
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| End bp | 1351481 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830056 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_002981237 |
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| Protein GI | 241662877 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.577364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.218021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC ACTCGCCCCT GCGCAGGACT TTGACCATTG CCGCCACGCT GCTTGCAACG
CTTGGCGTGC CCGCCGCATT TGCCAACAGC GATGCCCCGC CCCCGACCGC AGCCAAACAA
CTGCGCATCG GCTATCAGAA ATACGGCACG CTGACGGTGC TCAAGGCGCG CGGCACGTTG
GAAAAGCGTC TGGCCGTCCA GGGCATCGAA GTGAAGTGGA CCGAGTTTCC GGCCGGCCCG
CAGCTGCTGG AAGGCCTGAA CGTGGGCGCC ATCGATTTCG GCACCACGGG TGAAGCACCG
ACGATCTTCG CGCTGGCTGC CGGGGCGCAC CTCGTCTATG TCGGCAACCA GCCGCCCGCG
CCGGCCGGCG AGGCGATCAT CGTGCCGAAG ACTTCGCCGC TCAAGAGCGT GGCCGATCTC
AAAGGCAAGC GCGTTGCCTT CAACAAGGGC TCGAACGTGC ATTACCTGCT GGTGAAGCTG
CTGGAAAAGG CCAATGTGCC CTACAGCGAT ATCCAGCCTG TGTACCTCAC GCCCGCCGAT
GCGCGTGCCG CCTTCGAGCG CGGCGCCATC GACGCCTGGG TGATCTGGGA TCCGTTCTTT
GCCGCGGCCG AACAGCAACT GGGCGCGCGC GTGCTGGCCG ACGGCACGGG CGTGGTCAAC
AACTCGCAGT ACTTCCTGGC GTCGAAGGGC TATGCGGGCG CGCGGCCCGA TGTGCTGAAC
ATCGTGCTCG ATGAACTGAA GAAGACCGAC ACCTGGGCAG CGGCCAACCC GAAGGAAGTC
ACGACCATTC TCGGCCCGCA GCTCGGCCTG GAGCCCGCCG TGGTGGCGCG TTCGGTGTCG
CGCATTTCGT ATGGCATCCA GCCCGTGGGC GCCGAGGCGT TGGCCGACCA GCAGCGCATT
GCCGATACGT TCCACGCGCT CAAGCTGATT CCGCGCCCCG TGAAGGTGGC CGACTCTGCG
TGGCAGCCCA CGACGCAACA GGCAGCGCGC TGA
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| Protein sequence | MKTHSPLRRT LTIAATLLAT LGVPAAFANS DAPPPTAAKQ LRIGYQKYGT LTVLKARGTL
EKRLAVQGIE VKWTEFPAGP QLLEGLNVGA IDFGTTGEAP TIFALAAGAH LVYVGNQPPA
PAGEAIIVPK TSPLKSVADL KGKRVAFNKG SNVHYLLVKL LEKANVPYSD IQPVYLTPAD
ARAAFERGAI DAWVIWDPFF AAAEQQLGAR VLADGTGVVN NSQYFLASKG YAGARPDVLN
IVLDELKKTD TWAAANPKEV TTILGPQLGL EPAVVARSVS RISYGIQPVG AEALADQQRI
ADTFHALKLI PRPVKVADSA WQPTTQQAAR
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