Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1270 |
Symbol | |
ID | 8018915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1341223 |
End bp | 1343400 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644830050 |
Product | D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane |
Protein accession | YP_002981231 |
Protein GI | 241662871 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.822984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAA CCCGAACGGC GCGCCTGCGA CGGCACGTCT CACCAAGCAA CCTGATCGCC GCCGGTGCCG TGCTGCTGGC CGGCTGCGGC GTGCTAAGCG CCTGCGGCGG CAGCAATGAT GGCAACAACG TGCCGGGCAA TACCAAGCCG GCCTTTGCCG GCAAGGTGAC CATCAACCGG TACGACGGCG TATCCGACGA CCTGCTGACC GCTGGCCTGG GCGCAAGCGG CCTGGCTTCG GCCACCGCGC CGACCATCGC CAACCCCACG GCGCCCACGG CAGCCGAGCT GCGCCGCCTG GCGATCTACG CCAACTACCG AGCGCTGGTC GACACGGCGG CCAAGGGCGG CTACGGCACG CTCTATGGCC CGAACGTCGA TGCCAGCGGC AACGTCACGC AGGGCTCCGG CATGATCCCC GGCACCGAAT ACGTGACTTA CTCCGACGAC GGCACAGGGC AGCAGAACGT CGTGCTGCTC GTGCAGATTC CGGACAGCTT CGACGTCAAC AACCCCTGCA TCATCACTGC CACCTCGTCG GGCTCGCGCG GCATTTATGG CGCGATTTCC ACTGGCGAAT GGGGCCTGAA GCGCAAGTGC GCCGTTGCTT ATACCGACAA GGGCACCGGC GCCGGCCCGC ACGACCTGGC TACGGACACC GTCGCCCTGC AGGACGGCAC GCGCACCACG CGCAGCGCCG CCGGGTCTAA CGCGCACTTT GCTGCGCCGC TCACCAGCAG CCAGTTGGCT GCCTTCAACG CGGCCACGCC GAACCGGCTG GCGTTCAAGC ATGCGCATTC GCAGCGCAAC CCAGAGAAGG ATTGGGGTCT GTTCACGCTG CAGGCCGTGC AGTTCGCGTT CTGGGCGATC AACGACAAGA TCGCTGGGAC GAGCGGTGCG CTGGTCGGCA GCGCACTGCC GGTCCGTCCG GACAACACCA TCGTCATTGC GTCGAGCATC TCCAACGGCG GCGGCGCGGC CATTGCGGCG GCCGAGCAGG ACACCGGCGG GTGGATCGAC GGGGTGGCCG TGGGCGAGCC TGGCCTGAAC CTGCCGCCCA ACACCGGCGT GCAGGTGGTG CGCGGCGGCA CGACGCTGCC GACGACCGGC AAGCCGCTGT TCGACTACGT GAGCTACGCC AATGTGTTCC GGCTGTGCGC GGCATCGTCT GCGAGCGTTG CCACTGCGCC GGCACAGGCA TTCTTTGGAA GCCTCACGAC GTTCCCGGCA GGCGCGCAGG CCAACCGCTG CGCCGCGCTC AAGGCGGCCG GGTTGCTGAC GTCCACCACG GCGGCTGCGC AGGCCGACGA AGCCCTGCAG AAGATGCGTG CCTATGGTTG GGAGCCCGAG TCGGATCTCG TGCATGCGTC GATGTCGTTC TACGAGATCG ACCCATCGGT GGCGACCACC TTTGGCAACG CACTCTCGCG CGCCAGCGTG ACCGACAATC TGTGCGGATT GAGCTTCGCG GCAACCGACG CGTCGTTCCA TCCGACGGCC GTGAGCGCCA CGGCGCTCGC GCAGATGGCG GCGGTTGGCA ACGGCATTCC GCCTACTTCG GGCGTGCAGC TCGTCAACAA CAATGCCCAA GGTGGCCCGA CGCGGAGCAA CCAGTCGGTC GACTCTACCG GCACGCAAGC CGCCAACCTC GATGGCGCGC TGTGCCTGCG CAACCTGCTG ACGGGCGCCG ATGCGGCTTC GCAATCGCTG CAGGCCGGCA TCCGGCAGAC GCTGCGTACC GGCAACCTGC AGGGCAAGCC GGCGCTGATC GTGCAGGGCC GCAACGACGC GCTGCTGCCG GTCAACCATG GTTCGCGGCC GTATCTGGGG TTGAATGCCA AGGTGGAGGG TGGCTCGAGC AAGCTGTCGT ACATCGAGGT GATGAACGCG CAGCATTTCG ACGGCTTCAT CGACCTGGTG CCCGGCTACG ACACGTTGTT CGTGCCGCTG GTGCTGTATG AGCAGCGCGC GCTGGACGCC ATGTACGCGA ACCTGAAGAA CGGCACGCCG CTGCCGCCTT CGCAGGTGGT GCGCACCACC CCGCGCGGTG GCACGCCCGG TGCTGCACCG GCCATCAACG CGGCCAACGT GCCGAACTTC ACCAGCACAC CGGCGGCGGG CGACCGCATC TCGGTGAGCG TGTCGGGCGG CGTGGCGACG GTATCGGTGC CCAACTGA
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Protein sequence | MKPTRTARLR RHVSPSNLIA AGAVLLAGCG VLSACGGSND GNNVPGNTKP AFAGKVTINR YDGVSDDLLT AGLGASGLAS ATAPTIANPT APTAAELRRL AIYANYRALV DTAAKGGYGT LYGPNVDASG NVTQGSGMIP GTEYVTYSDD GTGQQNVVLL VQIPDSFDVN NPCIITATSS GSRGIYGAIS TGEWGLKRKC AVAYTDKGTG AGPHDLATDT VALQDGTRTT RSAAGSNAHF AAPLTSSQLA AFNAATPNRL AFKHAHSQRN PEKDWGLFTL QAVQFAFWAI NDKIAGTSGA LVGSALPVRP DNTIVIASSI SNGGGAAIAA AEQDTGGWID GVAVGEPGLN LPPNTGVQVV RGGTTLPTTG KPLFDYVSYA NVFRLCAASS ASVATAPAQA FFGSLTTFPA GAQANRCAAL KAAGLLTSTT AAAQADEALQ KMRAYGWEPE SDLVHASMSF YEIDPSVATT FGNALSRASV TDNLCGLSFA ATDASFHPTA VSATALAQMA AVGNGIPPTS GVQLVNNNAQ GGPTRSNQSV DSTGTQAANL DGALCLRNLL TGADAASQSL QAGIRQTLRT GNLQGKPALI VQGRNDALLP VNHGSRPYLG LNAKVEGGSS KLSYIEVMNA QHFDGFIDLV PGYDTLFVPL VLYEQRALDA MYANLKNGTP LPPSQVVRTT PRGGTPGAAP AINAANVPNF TSTPAAGDRI SVSVSGGVAT VSVPN
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