Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1263 |
Symbol | |
ID | 8018908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1335108 |
End bp | 1336427 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830043 |
Product | homoserine dehydrogenase |
Protein accession | YP_002981224 |
Protein GI | 241662864 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.692056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCCA TCAAGATCGG CCTGCTCGGG CTCGGTACCG TCGGTGGCGG TACCCTCAAG GTTCTGCAAC GGAACCAGGA AGAAATCCGC CGTCGCGCGG GTCGCGGCAT TGAAGTCGCC ATGATTGCCG TGCGCAATCT CGACAAGGCT CGTGCCATCG TGCAGGAAGC CGGTGCGACC GTGCCGGTGG TGAACGACCC GTTTGCGATT GTGGATTCGC CCGAGATCGA TATCGTCGTG GAGCTGATCG GCGGCTATGA CCTGACGCGC GAGCTGGTGC TGCGCGCCAT CGCCAACGGC AAGCACGTTG TCACCGCCAA CAAGGCGCTG CTGGCCGTGC ATGGCAACGA AATCTTCAAG GCCGCGCAGG ACAAGGGCGT GATGGTGGCA TTCGAAGCCG CCGTGGCCGG TGGCATCCCC ATCATCAAGG CGCTGCGCGA AGGTCTGACG GCCAACCGCA TCGAGTGGAT CGCGGGCATC ATCAACGGCA CCACGAACTT CATCCTGTCC GAGATGCGTG ACAAGGGCCT GGACTTCGAC ACCGTGTTGA AGGAAGCCCA GCGCCTGGGC TACGCCGAGG CCGATCCGAC CTTCGACATC GAGGGCTTTG ACGCCGCGCA CAAGCTCACG CTCATGAGCG CCATCGCCTT TGGCGTGCCG GTGCAGTTTG AGCGCGCATA CGTGGAAGGC ATCACCAAGC TGGAAGCCGT CGACATCCGC TACGCCGAAG AACTGGGCTA CCGCATCAAG CTGCTGGGCA TCACGCGCCG TGTCGAGGCG GGCATCGAGC TGCGCGTGCA TCCGACACTG GTGCCGGCCA AGCGCCTGAT CGCCAATGTG GAAGGCGCGA TGAACGCCGT GGTCGTCAAC GGCGATGCTG TGGGCCCGAC GCTGTACTAC GGCAAGGGTG CCGGTGCTGA GCCGACCGCT TCGGCCGTCG TCGCCGATCT GGTAGACGTG ACGCGCCTGC ATACGGCTGA CCCGGAGCAC CGCGTGCCGC ACCTGGCGTT CCAGCCGGAT GCGCTGTCCG ACACGCCGGT GCTGCCGATC GACGAAGTGC GTTCGAGCTA CTACCTGCGC ATGCGCGTGG CCGATGAGAC CGGCGTGCTT GCCGACATCA CGCGCATCCT GGCTGAAGGC GGCATCTCGA TCGACGCGAT GCTGCAGAAG GAATCCCGCG AAGGCGAGCC GCAGACCGAC ATCATCATGC TGTCGCATGT GACGGTCGAA AAACGCGTGA ACGCCGCCAT TGCCGCCATC GAAGCGTTGC CGACCGTGCT GTCGAAGGTC ACGCGCATCC GCATGGAAGA ACTGAACTGA
|
Protein sequence | MNPIKIGLLG LGTVGGGTLK VLQRNQEEIR RRAGRGIEVA MIAVRNLDKA RAIVQEAGAT VPVVNDPFAI VDSPEIDIVV ELIGGYDLTR ELVLRAIANG KHVVTANKAL LAVHGNEIFK AAQDKGVMVA FEAAVAGGIP IIKALREGLT ANRIEWIAGI INGTTNFILS EMRDKGLDFD TVLKEAQRLG YAEADPTFDI EGFDAAHKLT LMSAIAFGVP VQFERAYVEG ITKLEAVDIR YAEELGYRIK LLGITRRVEA GIELRVHPTL VPAKRLIANV EGAMNAVVVN GDAVGPTLYY GKGAGAEPTA SAVVADLVDV TRLHTADPEH RVPHLAFQPD ALSDTPVLPI DEVRSSYYLR MRVADETGVL ADITRILAEG GISIDAMLQK ESREGEPQTD IIMLSHVTVE KRVNAAIAAI EALPTVLSKV TRIRMEELN
|
| |