Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1248 |
Symbol | |
ID | 8018893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1319843 |
End bp | 1320469 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644830028 |
Product | protein of unknown function DUF47 |
Protein accession | YP_002981209 |
Protein GI | 241662849 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.108583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGGTC GCTTCATGCC CACCGAAGGC AAGTTTTTTG AGTACTTCAA CCAGCACGCC GAGTGCGCCG TCAAGGCGGC CCATGCGCTG AAGGAGTTGG TCAACGATTT GCCCAATGCC GAAATGCATG CACGCAACGT GCAGAATTTT GAAAAGAAGG CCGATCGCAT CACGCATGAC ACGATCGAAC TGTTGCATAA GACTTTCATC ACCCCGCTTG ATCGCGACGA GATCCACAAG TTGATCACGA CGATGGACGA CATCCTCGAC CTGATGGAAG ACGTGTCGCT CACCATCTCG TTGTACGACG TGACCAACGT GACAGACGAG GCGCGCCAGC TCGCGACCAT CTGCGTGGCT TGCTGCGAGG AAGTCCGCAA GGCCGTGGCG CTGCTCAGCG ACATGAACAA CGGCCGCCAG ATCCTCACCA TTGCCCACGA AATCGACCGT CTTGAGTCGG ATGCCGATCG CGTGATGCGC GCCGCCATGG CAAAGCTGTT CCGCACCGAA AACGACATCA AGCTGCTGAT CAAGCTGAAG GCGATTTACG AGCAACTGGA AAGCATCACC GACCGTTGCG AGGATGTCGC CAACATCATC GAAGGCATCG TGCTCGAGAA CGCCTGA
|
Protein sequence | MFGRFMPTEG KFFEYFNQHA ECAVKAAHAL KELVNDLPNA EMHARNVQNF EKKADRITHD TIELLHKTFI TPLDRDEIHK LITTMDDILD LMEDVSLTIS LYDVTNVTDE ARQLATICVA CCEEVRKAVA LLSDMNNGRQ ILTIAHEIDR LESDADRVMR AAMAKLFRTE NDIKLLIKLK AIYEQLESIT DRCEDVANII EGIVLENA
|
| |