Gene Rpic12D_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1193 
Symbol 
ID8018837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1266180 
End bp1267277 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content63% 
IMG OID644829975 
ProductAFG1-family ATPase 
Protein accessionYP_002981157 
Protein GI241662797 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.832181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC AGGAAACCTA CCTACAGGAA CTGAAGGCGC GCGGCTACCA GCCCGACGAA 
GCGCAGCAAC GCGCTGTCGA CCGCCTGCAG CGGTGCTACG AGGAATGGCT CGCCTACAAG
GCCCGTCGTT CGAATGCGCT GCGCAAGATG CTCGTGCGCC CCGATTTGCC GCGTGGCGTC
TACATGTGGG GCGGGGTGGG GCGCGGCAAG TCGTTCCTGA TGGATGCGTT CTATAGCTGC
GTGCCATTGG TGCGCAAAAC GCGTCTGCAC TTTCACGAGT TCATGCGCGA AGTGCATCGC
CAGCTGGAAG AATTGCGTGG CCGCGCTGAT CCGCTGGACG AGTTGGCTCG ACGCATCGCC
AAGCGCTACC GCCTGATCTG CTTTGACGAA TTCCACGTCA GCGACGTTGC CGACGCGATG
ATCCTGCACC GCTTGCTCGA TCAGTTGTTT GCCAACGGCG TGCAGTTCGT GATGACGTCC
AACTATCGGC CCGATTTGCT GTATCCGGAC GGCCTGCATC GCGACCGCGT GCTGCCGGCC
ATCGCCCTGC TGCAGGAGAA GCTCGACATC CTCAACGTCG ACGCGGGAGT CGATTACCGC
AAGCGGGCGA TGGAGCAGGT GCAGGCGTAT TACACGCCGT TGGGCGCCAA GGCCAACTCG
GCGTTGCGGG ATGCATTTAC GGCGGTGGCC GGGGTGCCGG ACGAGTCGCC GGTGCTGCGC
ATCGAGCACC GTGAGATTCG CGCAGCGCGC AAGGCCGGCG GCGTCGTGTG GTTCGACTTC
GCCACGCTGT GCGGGGGGCC GCGCTCACAG AACGATTACC TGGAAATCGC CTCGCGCTTT
CACACCGTCA TCCTGGCCGA TGTGCCCAAG ATGACGCCGC GCATGGCGTC CGAAGCACGC
CGCTTCACGT GGTTGATCGA CGTGTTCTAC GACCACAAGG TCAAGCTGCT GATGTCGGCG
GAGGTGACGG CGGAGGAGCT GTACACCGAA GGCCAGATGG CCAACGAATT CCAGCGCACC
GTGTCGCGCA TCGTCGAGAT GCAGTCGCGC GAATACCTCG AAGCACCTCG CCGCGAAGTG
GACACGTCGT TGACGTGA
 
Protein sequence
MNVQETYLQE LKARGYQPDE AQQRAVDRLQ RCYEEWLAYK ARRSNALRKM LVRPDLPRGV 
YMWGGVGRGK SFLMDAFYSC VPLVRKTRLH FHEFMREVHR QLEELRGRAD PLDELARRIA
KRYRLICFDE FHVSDVADAM ILHRLLDQLF ANGVQFVMTS NYRPDLLYPD GLHRDRVLPA
IALLQEKLDI LNVDAGVDYR KRAMEQVQAY YTPLGAKANS ALRDAFTAVA GVPDESPVLR
IEHREIRAAR KAGGVVWFDF ATLCGGPRSQ NDYLEIASRF HTVILADVPK MTPRMASEAR
RFTWLIDVFY DHKVKLLMSA EVTAEELYTE GQMANEFQRT VSRIVEMQSR EYLEAPRREV
DTSLT