Gene Rpic12D_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1163 
Symbol 
ID8018806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1229719 
End bp1230291 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content62% 
IMG OID644829944 
Productphosphoribosyltransferase 
Protein accessionYP_002981127 
Protein GI241662767 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.433004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.806121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC CGATCAACGA CGACTCCCAT CTATGGGTGT CCTGGGATGA CTACCACGGC 
CTGATCGAGC GCCTGGCGCT TATCGTGCAT GAGTCTGGCT GGAAGTTCGA CAAGATTCTG
TGCCTGGCGC GGGGCGGGTT GCGCGTTGGC GATCAGCTGT CGCGCATCTA CGACCTGCCG
TTGGCTATTC TGGCGACCAG CAGCTATCGC GAAGCTGCTG GCACGCAGCA GGGCGATCTC
GACATCGCCC AATACATCAC GATGACGCGT GGCGAGCTGT CGGGCCGTGT GTTGCTTGTG
GACGATCTGG TGGATTCGGG TGTCACGCTG GAGCGTGTGG GGCGTCACCT GAAGGAGCGC
TATCCGGCCG TGACCGACGT GCGTACCGCT GTGCTGTGGC ACAAGGCATG CTCGAAAATC
AAACCGGATT ACGCTGTCCA GTATCTCGCA ACCAATCCGT GGATCCATCA ACCGTTCGAA
GAGTACGACA CGCTGCGCCC CCACAACCTG GCCGCGTGGA TCAAGCGCGG GAAGGCGCGT
TCGGCCGGCA ACGGCGAAGC GTCGGCGGCC TGA
 
Protein sequence
MNQPINDDSH LWVSWDDYHG LIERLALIVH ESGWKFDKIL CLARGGLRVG DQLSRIYDLP 
LAILATSSYR EAAGTQQGDL DIAQYITMTR GELSGRVLLV DDLVDSGVTL ERVGRHLKER
YPAVTDVRTA VLWHKACSKI KPDYAVQYLA TNPWIHQPFE EYDTLRPHNL AAWIKRGKAR
SAGNGEASAA