Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1125 |
Symbol | |
ID | 8018767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1185514 |
End bp | 1188357 |
Gene Length | 2844 bp |
Protein Length | 947 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644829906 |
Product | hypothetical protein |
Protein accession | YP_002981089 |
Protein GI | 241662729 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.290097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGC TTGCCTTCGC GCCTGGCCCA GCATTCCTTT CGCGTGCCGC CGACGCTGCA TGGCGCTTTC TGGATGCGCA TGCGCAACCC CCCGGTACCG CGACGATCGT CGTGCCGACA GCCGCGCAGA TTCCTGGGGT GCGCGGCGCT CTGCATGCCG GTGCGCAAGC AGCCGGCACG CCGCGTTTGC TGCCGCGCAT TCTGACCCTG GGGCATTGGC TGCTCGATTT GCCACCGGAA GCAGGTTCGC CCGCCGGGCG CACGCCGCTG TCGCGATTAC TGGCAGTGCA GCAGGCGCTC AAGACGCTGG CTTGGCTGCG TGAAGCGCTG GGCGCGCAGG ACGATGCCGC CCTGTGGGGC GTAGCGCAGG TGCTCGTGAC GGTGTCGGAC GACTTGTCGC AACGTTGGCT GACGCTCGAT GCCGCACACA GTGGCGCAGA TGGGCGGGCT GATGAGCTGG AGTCGGCGTT GGCGGAAGCG TTGGAACGCA CTTACGCACA ATTGTCCGAA CGCTTTCTCG GCACCGAATC GCGCATTGTG CTGACGTTCT GGCGGTTGCT TTCAGGCGCA GCGGACCCGA TTCCAATGCG GCTGCGTGCC ATGCAGCGTC TGCTTGACGA ATTGCGCGGC CCCATCGTGT GGATGAGCCC GACGGACCCC GAGGCGGTCG ATTTGGATTT CCTGCAGCGC GCCGCCGAGC GGGTGCCCGT GTTGAGCATC GGCTACGACT GGAATGCGCC TGAAAGCGGC GCGTCTGCGG CGCCTTCCAC ACACGCGGAT TTCCGCAATC TGCTGCTGCA CGCCTGGCCC GAATGCGCCA CGCCCGCCCA GGCGGCGGAT GATGCTGCCG CCGCGCAATT GCCCGCGCCA ATCCTTCGCA TTGCAGGCGC TGCACGTTTT GAAGACGAGG CAGCCTTCGC CGCGCATACG CTGGTCGATT GGCTGAATGC CGGGCGCCGC TCGTTGGCGC TGGTGGCACA GGATCGCATC GTCGCGCGGC GCGTTCGCGC GTTGCTGGCG CGCGTGAACG TGCCGGTGCG CGATGAGACC GGCTGGAAGC TTTCCACGAC GCGCGCCGCT GCGGCACTTA TGCGCTGGGT CGACGTGGTG CAGGGCGACG GCGATACCGC GGCGCTGCTC GATCTCATCA AGAGCCCGTT CTGTTTGCGC GATGCCGATG CCGGCACGGC CACGCCTGCC TGGGTAGCAG AACTGGAGCG CCGGGTGCGC CGGCATAACG TTTCAGGTGG ATGGGGGCGA TTGCGCCGGC TGGTTACCGA TCGCCCTGCG AGTGATGCCG AGGGCGAAGC AAAGGTCAGC CGCCTTGCCG ATCGTCTGGG CGTGCTGGCC GACGAAGCGG CGCTGTGGCG CCGGGCCGGC AGCGCCAAGC TCGACGCGTG GGTAGCGCTG TTGGCAGGCA CGCTCGATCG TCTGCATATG CGCACTGGGT TGCAGAACGA CGATGCGGGC CGGCAACTGC TGGACTGGAT TGACCGGCTG CGTACGTCCA TACATGGCAG CACCGATGCG GGCGCGCGTT ACTCCCTGAC GGAATGGCGC GCGTTGCTCT CGATGCTGCT CGAATCTGCG GTCTTCAGTG AGCCTTCACC GCCAGCGGAC CGGCGTGTTG TCATCCTGCC GCTGAATGGC GCGCGCATGC GGCGTTTTGA TGGCGTGGTG GTGGTGGGTT GTGACGATGC GCAGTTGCCG TCTGCGCAGC CCGAATGGCT GTTTTTTTCT AACGACGTGC GGCGCGAACT CGGTTTGCCC GACCGCGCAC AGCGCTTTGC GCAGCAGGCT CGTGACTTGG CCGAGGTGCT CCTCAACCAG CCCGAGGTGG TGTTGACCTG GCAACGCCAC GGCGGACGTG GCGAGCCGCA TCGCCTTTCC GGCTGGCTTG AACGCTTGCA ACGGCGCTTG GCGGTGAGCG GCGTGCGTAT CGATACGTCA GTCACGTTGC CCAGTTTGCA GACCACGAGC CAGCCCACCG ACATGCCCGC GCCCGCAGCG CCGACGCTGG TGCCGTCCAC GCTGAGCGCG GCCGCATACA ACAGTCTGCG GCGCTGTCCA TACCAGTTCT TCGTCGGTCG CATGCTGCGG CTGGGCGAGC TGGAAGAAGT TTCCGATGAA CTGGAGAAAC GCGACATCGG CGGGATCCTG CACGCGATCC TGCATCGTTT TCACCGGCAG TTGCTGGAAA CGCCGATGCA CGATCCGGCC GATCGTCTGA GTCTGCTGCA GACCATTACC GACGAACAGT TTGGCCCGCT GTTGGCCGAG GACGGCAACG CGTTGCGCTT CTATCGGCGC TGGCTCGGTG TGATGCCGTC GTACCTGGCG TGGCAGGCCG CTCGCGAGGC GGATGGCTGG CGCTTTGAGG CAGGTGAAGT CGATGTCGAT ACGTCCATCA CATTGTCCGA CGAGCGCGCG CTGCGCTTAC GCGGCCGGAT CGACCGCATT GATGTGCACG ACGAACACGG CGTGGCGGTG CTCGATTACA AGACGCAGTC GCAAATGGCG CTGGTGCGTC GCGCCAAGAC GCCGTTTGAG GATTGCCAGC TTCCGTTTTA CGGCGTCCTC GATGCGCGTG CAGATTCGGG CGGGTGGGTT TCGCTCGACG GCGAGGCCCG CGGCGACAAG CGCGACGTTG CATTGCCCGA TTTCACGCAA GTCGTCGATT GGTTGATCGA GCAGATGCAA AAGGACATGA CGGCCCTCGC TGCCGGTGCG CCCCTGCCGG CGTTCGGTGA TGAATCGGCG TGCCGCTACT GCGCGGCGCG TGGCCTATGC CGCAAGGGGT ATTGGACCGA AGGCGCACCG CGCGAGCCGG AGGGCGCGGC ATGA
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Protein sequence | MQTLAFAPGP AFLSRAADAA WRFLDAHAQP PGTATIVVPT AAQIPGVRGA LHAGAQAAGT PRLLPRILTL GHWLLDLPPE AGSPAGRTPL SRLLAVQQAL KTLAWLREAL GAQDDAALWG VAQVLVTVSD DLSQRWLTLD AAHSGADGRA DELESALAEA LERTYAQLSE RFLGTESRIV LTFWRLLSGA ADPIPMRLRA MQRLLDELRG PIVWMSPTDP EAVDLDFLQR AAERVPVLSI GYDWNAPESG ASAAPSTHAD FRNLLLHAWP ECATPAQAAD DAAAAQLPAP ILRIAGAARF EDEAAFAAHT LVDWLNAGRR SLALVAQDRI VARRVRALLA RVNVPVRDET GWKLSTTRAA AALMRWVDVV QGDGDTAALL DLIKSPFCLR DADAGTATPA WVAELERRVR RHNVSGGWGR LRRLVTDRPA SDAEGEAKVS RLADRLGVLA DEAALWRRAG SAKLDAWVAL LAGTLDRLHM RTGLQNDDAG RQLLDWIDRL RTSIHGSTDA GARYSLTEWR ALLSMLLESA VFSEPSPPAD RRVVILPLNG ARMRRFDGVV VVGCDDAQLP SAQPEWLFFS NDVRRELGLP DRAQRFAQQA RDLAEVLLNQ PEVVLTWQRH GGRGEPHRLS GWLERLQRRL AVSGVRIDTS VTLPSLQTTS QPTDMPAPAA PTLVPSTLSA AAYNSLRRCP YQFFVGRMLR LGELEEVSDE LEKRDIGGIL HAILHRFHRQ LLETPMHDPA DRLSLLQTIT DEQFGPLLAE DGNALRFYRR WLGVMPSYLA WQAAREADGW RFEAGEVDVD TSITLSDERA LRLRGRIDRI DVHDEHGVAV LDYKTQSQMA LVRRAKTPFE DCQLPFYGVL DARADSGGWV SLDGEARGDK RDVALPDFTQ VVDWLIEQMQ KDMTALAAGA PLPAFGDESA CRYCAARGLC RKGYWTEGAP REPEGAA
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