| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1105 |
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| Symbol | |
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| ID | 8018743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1160643 |
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| End bp | 1162061 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829882 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_002981069 |
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| Protein GI | 241662709 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.340413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.54377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTT CAAGGAAACC GACGGTCGCT GATTCGTCGG CTGATCTCGT CAACAAGGTC
GCACAACGCG TTGCCGCGTG TGCGGCCTTT GTTGCTTCTA GCGGGGCCGA AACGCCGATA
GTGGCGATCG CCCTGTCAGG CGGGCGGGAT TCTGCGGCGC TGCTGCACGC GTGTGCCGCG
TGGCGCGACG CGGGTGCCCG CGTGCAGCTC GTGGCGCTCC ATATTCACCA TGGCCTGCAT
GCTGACGCCG ATGTCTGGGA ATGCGCGTGT CGGCGCATGG CCCAAGCGGT CGGCGTTACG
TTTCATGCGC GCCGCGTCAA TGTAGCGGTT GATGGGGGGC GGGGCGTTGA AGAGGCGGCG
CGCGAAGCCC GGTACGCAGC GCTCGAAGCG CTCTGCACGG AGACGGGCGC CTCCATTCTG
CTGACGGCGC ATCATCAGGA TGACCAAGCG GAAACGGTGC TGCTGCAACT GATGCGCGGT
GCCGGCCTCG ATGGCCTGGC CGCCATGCCG ATGGCGCGGG CGGGTGCAGT CACGTTGCTG
CGTCCATGGG TCGATGCACC GCGCAGCGAG ATCGAACTGT ACGCACATGC CCACGCGCTC
TGCTGGGTCG AAGATCCTTC CAACACCGAC GCACGCTATG CACGCAATGC ATTGCGTCCA
CTGCTTGCGG GCATGGCGGA TCATTTCCCG GCCTATCGCG AGGCGCTGTC GCGCAGTGCG
GCACATCTGG CGGATGCGGC TGCGTTGATC GATGAGATTG CGCAGGCGGA CTTGAGCCAG
GTCGCGTCGG CCAATGAACT GAACGTGGCG GCGTTGAGCG CGCTGTCCGC GCCACGTCAG
CGTGCGGTGC TGCGTGCCTG GTTGGCCAAG GCGGGCATGC GCGCGCTGTC GAGTCGCCGC
CTGGAGGATC TGCATACGCA ACTGGTTGAC GCGCGAGATG ACGGTGCACT GCGCATTGAA
TTGCCGACTG GGCAGGTCAG GCGCTACCGT GGCATTGCAT GGATCGACAC TGGCACCAAC
GATCGCCCCG GGCAGGCCGC GGTCGCGATC GGGGCCCAGC TGTTCGAGCC GGCGCATCCG
GCCGAGCAGC GTGTGGCGGT GGACGCATGG GGCGGGGCGC TGTTGTTTGC GCCCGTGGCG
AGCGATGGCG TTGCGACGCA AACTTTGCAA GCGCAGCTGG TCCTGTCGCC CCGGCGCGGT
GGCGAGCGCA TCGTGCTGCG CCCGGGCGGG CCGTCGCGGG CGCTCAAGCA GGCTTACCAG
GAAGCCGGCA TTCCTGCGTG GGAGCGCGAG CGTTTGCCAC TGCTCTATGC AGGCGAAATG
CTGGTGTTTG CCGCGGGGCT GGGAATGAAC CAGGCGGCCA CGCATAGCGG TACTGGCTGG
CGCATCACGT GGCGTCCTGG CCTTGAGGGT GCGTCGTGA
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| Protein sequence | MASSRKPTVA DSSADLVNKV AQRVAACAAF VASSGAETPI VAIALSGGRD SAALLHACAA
WRDAGARVQL VALHIHHGLH ADADVWECAC RRMAQAVGVT FHARRVNVAV DGGRGVEEAA
REARYAALEA LCTETGASIL LTAHHQDDQA ETVLLQLMRG AGLDGLAAMP MARAGAVTLL
RPWVDAPRSE IELYAHAHAL CWVEDPSNTD ARYARNALRP LLAGMADHFP AYREALSRSA
AHLADAAALI DEIAQADLSQ VASANELNVA ALSALSAPRQ RAVLRAWLAK AGMRALSSRR
LEDLHTQLVD ARDDGALRIE LPTGQVRRYR GIAWIDTGTN DRPGQAAVAI GAQLFEPAHP
AEQRVAVDAW GGALLFAPVA SDGVATQTLQ AQLVLSPRRG GERIVLRPGG PSRALKQAYQ
EAGIPAWERE RLPLLYAGEM LVFAAGLGMN QAATHSGTGW RITWRPGLEG AS
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