Gene Rpic12D_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1102 
SymbolcysS 
ID8018740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1157359 
End bp1158750 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content63% 
IMG OID644829879 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_002981066 
Protein GI241662706 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.133381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAC TCAAGATCTA CAACACGCTC GCGCGTGAGA AACAGACGTT CGTCCCCATC 
GAGCCAGGCC GCGTGCGCAT GTACGTGTGC GGGATGACGG TGTACGACTA CTGTCACGTC
GGGCATGCGC GGGTCATGGT GGTGTTCGAC ATGGTGCAGC GTTGGCTGCG CGCGGCAGGT
TACGACGTCA CCTACGTGCG CAACATCACC GACATCGATG ACAAGATCAT CAAGCGTGCG
GTCGAGAACG GCGAGACGAT GAGTGCGCTG ACGGGCCGCT TCATCGCTGC CATGCACGAA
GACGCCGATG CGCTTGGCGT GCAGCGCCCC GATTACGAAC CCCGCGCCAC CGAATACGTG
CCGCAGATGC TGGGCATGAT CGGCAAGCTG CAGACGAACG GCCTCGCCTA TCAGGCGACC
GACGGCGACG TGAACTACGC GGTGCGCAAA TTCCCCGGTT ACGGCAAGCT GTCCGGCAAG
TCGCTCGAAG ACCTGCGCGC GGGCGAGCGC GTGGCGGCCA ATGATGCCAA GCAGGACCCG
CTCGACTTCG TGCTGTGGAA ATCCGCCAAG GCCGAGGAAC CTGCAGAATC GCGCTGGGCT
TCGCCGTGGG GCGAGGGGCG TCCAGGCTGG CATATCGAGT GCTCGGCGAT GAGTTGCGAA
CTGCTGGGCG AACATTTTGA CCTGCACGGC GGTGGCGCAG ACTTGCAGTT CCCACACCAT
GAAAACGAAA TCGCCCAGTC CGAAGGCGCG ACCGGCAAGA CGTTCGTCAA CACGTGGATG
CACAACGGCT TCGTCCGTGT GAACGACGAG AAGATGTCGA AATCGCTCGG CAACTTCTTC
ACCATCCGCG ATGTGCTGAA GGTGTACGAC GCAGAGGTCG TGCGTTTCTT CATCCTTCGC
TCGCACTATC GCAGCGACCT GAATTACAGC GACGCGCACC TCGACGACGC GCGCCATGCG
CTTACGCGTT TGTACACGGC GCTCAAGGAC GTGCCAGCCG CAGCGGGCGC CAAGCCTGAC
TGGAACGAGT CGCATGGCAA GCGCTTCCTG GAAGCGATGA ACGACGACTT CAACACGCCG
GTTGCCGTGT CGGTGCTGTT TGAGCTGGCG AGCGAAGTGA ACAAGACGCG CTCGCCCGAG
CTGGCTAGTC AACTGGCCGC GCTGGCGGGA GTGCTGGGCC TGCTGGGCCG CGATCCGCAT
GCGTTCCTGC AGGGCGGTGT GTCGCCCGAT GGCTTGGACG CCGCCGAAGT GGAAGCGCGT
ATCGAAGAGC GCCGCGCCGC CAAAGCCGCA CGCGATTTCG CCCGTGCCGA TGCGATCCGT
GCCGATTTGC TCGCTGCAGG CATCGTTTTG GAAGACAAAC CGGGTGGGGT GACCGAATGG
AGACGCGCAT GA
 
Protein sequence
MESLKIYNTL AREKQTFVPI EPGRVRMYVC GMTVYDYCHV GHARVMVVFD MVQRWLRAAG 
YDVTYVRNIT DIDDKIIKRA VENGETMSAL TGRFIAAMHE DADALGVQRP DYEPRATEYV
PQMLGMIGKL QTNGLAYQAT DGDVNYAVRK FPGYGKLSGK SLEDLRAGER VAANDAKQDP
LDFVLWKSAK AEEPAESRWA SPWGEGRPGW HIECSAMSCE LLGEHFDLHG GGADLQFPHH
ENEIAQSEGA TGKTFVNTWM HNGFVRVNDE KMSKSLGNFF TIRDVLKVYD AEVVRFFILR
SHYRSDLNYS DAHLDDARHA LTRLYTALKD VPAAAGAKPD WNESHGKRFL EAMNDDFNTP
VAVSVLFELA SEVNKTRSPE LASQLAALAG VLGLLGRDPH AFLQGGVSPD GLDAAEVEAR
IEERRAAKAA RDFARADAIR ADLLAAGIVL EDKPGGVTEW RRA