Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1090 |
Symbol | |
ID | 8018728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1145158 |
End bp | 1146054 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829867 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002981054 |
Protein GI | 241662694 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA CGCTCGAAGA ACTGCTTGCC TTCCGCACCG TCGTCGATAC GGGCTCCGTC ACGGCGGCGG CTGAGCAGCT GGGCCAGACG GTGTCGGGCG TGAGCCGCGC GTTGCGCCGC CTGGAAGAAA AGCTGGACAC CACCCTGCTC TCGCGCACCA CGCGGCGGCT GTCGCTCACC GACGAGGGCG CGACGTTTCT GGCGCAGGCG CGCAGGATCC TCGCCGCCGT CGACGAGGCC GAGGAGCAGA TCGCCCTGCG CCGCCAGCAG CCTGCCGGCC GCCTGCGTGT CAATGCGGCC ATGCCGTTCA TGCTGCATGT GGTGGCGCCC CTGGTGCCCG ACTTCCGCGC ACGGTATCCG CAGATCGACC TGGAGCTGAA CACCAACGAC CTGATCATCG ATCTGCTGGA AGAGGACACC GACGTGGCAA TCCGCATCGG CACACTGCGC GATTCCACCC TGCGGGCACG CCTGCTTGGC ACGCGGCGGC TTCGCGTCCT CGCGAGCCCC GCGTATCTGA AAGCGCACGG CCGCCCGCGC AATGTCGATG ACCTGCAAAC GCACGCCCTG CTCGGCTTCG TTCAACCGGA ATCGCTGAAC CTGTGGCCCC TGCGCGGCCC GCACGGCGAC CGCCTGCGCA TCGAACCCAC GCTCAAAGCC TCCAGCGGTG AAACCCTGCG CCAGCTTGCA CTGCAAGGCA CCGGCATCGT CTGTCTGGCG GATTTCATGA CCGTGGAAGA CCGGCGCTCA GGCGCCCTTG TGCAGGTCCT GCCGGACGCC ACGGTGGAGG TGCTGCAACC GATTCACGCG GTGTACTACC GCAACACCCA GTTGGCTTCG CGGATTGCCT GCTTTCTCGA CTTTCTTGAA GCCCGGCTCG CAGACGTTGA GCGGTGA
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Protein sequence | MKTTLEELLA FRTVVDTGSV TAAAEQLGQT VSGVSRALRR LEEKLDTTLL SRTTRRLSLT DEGATFLAQA RRILAAVDEA EEQIALRRQQ PAGRLRVNAA MPFMLHVVAP LVPDFRARYP QIDLELNTND LIIDLLEEDT DVAIRIGTLR DSTLRARLLG TRRLRVLASP AYLKAHGRPR NVDDLQTHAL LGFVQPESLN LWPLRGPHGD RLRIEPTLKA SSGETLRQLA LQGTGIVCLA DFMTVEDRRS GALVQVLPDA TVEVLQPIHA VYYRNTQLAS RIACFLDFLE ARLADVER
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