Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1084 |
Symbol | |
ID | 8018722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1136858 |
End bp | 1138054 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829861 |
Product | NlpBDapX family lipoprotein |
Protein accession | YP_002981048 |
Protein GI | 241662688 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3317] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.170875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC ACCAAACCCG TCGCGGGGCT ATGGCGACGT CCGCTCAACT GTTGCTGGCC GCGTTGTCGG TTGCCCTGAT TTCCGGTTGC GATACCGTCA ATGAGGTGAT GCAGCCGGAC CGCATCGATT ACAAATCGCA GGCCAAGAAG GGCCCGACGC TTGAGGTCCC GCCCGACCTG ACCGGCATCC AGGCGGATCG CCGCTATGCC GCACCGGACA CGGGCACGAC CACGCTGTCG GCCTACACGT CGACGGCGCC CAAGGTCACG ACGCCGGGCT CGGGCACCGA GAACGTGCTG CCCGCCGTGT CCGACATGCG TATCGAGCGC GATGGCAATC AGCGCTGGCT GGTTGTGAAG ACCACGCCGG ATGCCCTGTG GCCGCAATTG CGCACCTTCT GGCAAGAGCT GGGCTTCCTG CTGGTGATCG ACTCGCCCGA GACCGGCATC ATGGAAACCG ACTGGGCCGA GAATCGCGCG AAGATTCCGC AGGACATCAT CCGCCGCACC GTCGGCAAGG TGTTCGATGG CTTGTACTCG ACGTCTGAGC GTGACAAGTT CCGCACCCGC ATCGAGAAGG GTCCGAACGG CACGGTCGAA GTCTACATCT CGCACCGCGG CGCGCAGGAA CAACTGGTCG GTTCGTCAAA GGACCAGACC GTGTGGACGC CGCGTCCGGC CGATCCGGAA CTCGAAGCCG AATTCCTGTC GCGCCTGATG CAGCGTCTGG GCGCCAGCAA GGAAGCCGCA CAGCAGAAGC TCGCGCAAAC GCAGGCAGCG CACCCGGTGC AAGACGGCAC GAAGGCTGAA CCGGCTCCGC GTACCGGCCC GTCGTTGCTC ACGCAGTCGA ATGGCCAACC GATCCTGCAG GTGCCGGAGC CCTTTGATCG TGCATGGCGT ACCGTGGGCC TGGCGCTGGA TCGCGTGAAC TTTACCGTGG ATGATCGCGA TCGTTCGCAA GGCGTGTATT TCGTTCGCTA CGCTGATACG CGTGCCGAAG CGAATGCACC GGGCTTCTTC TCGCGCCTGT TCTCGGGCAC GAAGATCGAA GACCTCAAGC GCGCCAAGCG TTACCGCGTG GTGGTGAAGG ATGCCGGCAC GTCGTCGACG GTGCTGGTGC AGAACGACGA CGGCTCCGCG CAGACCGGTG ACATCGGCAA GCGCATCCTG TCGCTGCTCG ACGAGCAACT GCGGTAA
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Protein sequence | MKLHQTRRGA MATSAQLLLA ALSVALISGC DTVNEVMQPD RIDYKSQAKK GPTLEVPPDL TGIQADRRYA APDTGTTTLS AYTSTAPKVT TPGSGTENVL PAVSDMRIER DGNQRWLVVK TTPDALWPQL RTFWQELGFL LVIDSPETGI METDWAENRA KIPQDIIRRT VGKVFDGLYS TSERDKFRTR IEKGPNGTVE VYISHRGAQE QLVGSSKDQT VWTPRPADPE LEAEFLSRLM QRLGASKEAA QQKLAQTQAA HPVQDGTKAE PAPRTGPSLL TQSNGQPILQ VPEPFDRAWR TVGLALDRVN FTVDDRDRSQ GVYFVRYADT RAEANAPGFF SRLFSGTKIE DLKRAKRYRV VVKDAGTSST VLVQNDDGSA QTGDIGKRIL SLLDEQLR
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