| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1056 |
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| Symbol | |
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| ID | 8018694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1110000 |
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| End bp | 1111250 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829833 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
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| Protein accession | YP_002981020 |
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| Protein GI | 241662660 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.530836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.504254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACTTC CATACGAATG GCAGATTGGC TGGCGGTATA CACGCGCAAG CAAGCGCGCC
AGCCGCAACA GCTTCATCTC TTTCATTTCG CTCATCTCCA TGCTCGGCAT TGCGCTGGGG
GTGGCGGCGC TGATCATCGT GCTCTCGGTC ATGAACGGCT TCCAGAAGGA AGTGCGGGAC
CGCATGCTGT CGGTTCTGGC CCATATCGAA GTGATGGCGC CGAACAGCCT GCCGGACTGG
CAGCGTACCG CCAACGAGGC GATGCAGAAC AAGGAAGTCA TCGGCGCGGC GCCTTACGTG
GGCGCGCAGG CCATGATCAC GCGCGACGAG GCGGTGCGCG GCGTGCTGCT GCGCGGGGTG
TCGCCGGCGG ACGAGCCGAA GGTGTCGGAC ATCGCCAAGG ATTTCAAATC AGGCACGATC
GATGATCTGA AACCCGGCGA ATTCGGCATC GCCCTGGGCA GCCAGCTGGC CAACGGCCTG
GGCGTGCATC AAGGGGACAA GGTCACGCTG GTGGCGCCGC AGGGCACCAT CACGCCGGCG
GGCGTGCTGC CGCGGCTGAA GCAGTTCACC GTGACGGGCA TCTTCGAATC GGGCCACTAC
GAGTTCGACA GCTCGCTGGC GCTGGTCAAC ATGGACGACG CCGAACGCCT GTTCCGCCTC
GATGGCCCGA CCGGCGTGCG CCTGAAGCTG GTCGACATGG ACCGCGCCCC GCAGGTGGCC
GAAGCCCTGT CGCGCACGTT GTCCGGCGAG CTGTACATCC GCGACTGGTC ACGCCAGAAC
CGCAACTGGT TTGCCGCCGT GAAGACCGAA AAGAAGATGA TGTTCATCAT CCTCACATTG
ATCATCGCCG TAGCGGCGTT CAACCTGGTG TCGACGCTGG TGATGACGGT GACGGACAAG
CAGGCCGACA TCGCTATCCT GCGCACCATG GGCGCACAGC CGGCGTCGAT CATGAAGATC
TTCATCGTGC AGGGCGTGGC GATCGGGTTT ATCGGCACGT TGCTGGGCGT CGGCTTCGGC
ACGCTCATCG CTTACAACAT CGACGTGATC GTGCCGTTCA TCGAGCGTCT CTTCCACGTG
CAATTCCTGC CGCGTGACAT CTATTTCATC AGCGAACTGC CCTCGGACCC CCGCGTGAAC
GACATTGCGA CCATTGGCAT CATCTCTTTC ATCCTCGCGT CGGTGGCGAC GCTGTATCCG
AGCTGGCACG CCTCACGCGT GAATCCGGCG GAGGCACTGC GCTATGAGTG A
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| Protein sequence | MKLPYEWQIG WRYTRASKRA SRNSFISFIS LISMLGIALG VAALIIVLSV MNGFQKEVRD
RMLSVLAHIE VMAPNSLPDW QRTANEAMQN KEVIGAAPYV GAQAMITRDE AVRGVLLRGV
SPADEPKVSD IAKDFKSGTI DDLKPGEFGI ALGSQLANGL GVHQGDKVTL VAPQGTITPA
GVLPRLKQFT VTGIFESGHY EFDSSLALVN MDDAERLFRL DGPTGVRLKL VDMDRAPQVA
EALSRTLSGE LYIRDWSRQN RNWFAAVKTE KKMMFIILTL IIAVAAFNLV STLVMTVTDK
QADIAILRTM GAQPASIMKI FIVQGVAIGF IGTLLGVGFG TLIAYNIDVI VPFIERLFHV
QFLPRDIYFI SELPSDPRVN DIATIGIISF ILASVATLYP SWHASRVNPA EALRYE
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