| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1052 |
|---|
| Symbol | |
|---|
| ID | 8018688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1105504 |
|---|
| End bp | 1106238 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644829827 |
|---|
| Product | protein of unknown function DUF899 thioredoxin family protein |
|---|
| Protein accession | YP_002981016 |
|---|
| Protein GI | 241662656 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000759433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0411864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGC ACCCCGTCGT TTCAAGAGAC GAATGGCTTA TCCAGCGCCG AGCGTTGCTG
GCGCGCGAGA AAGAGGCCAT CCATCTGCGC GACGCCATCA ACGCCGAGCG CCAAGCGCTG
CCGTGGGTCA AGGTCGATGC GGCATACGTG TTCGAGTCGC CGGAGGGCAA GAAGACGCTG
CTCGACCTGT TCGACGGCCG CAGCCAACTG ATGGTCTATC ACTTCATGCT CGGCCCAGAC
TGGGATGCGG GCTGTCCGGG GTGCTCCTTC CTGTCCGACC ATATTGGCGG AATGCTCCCG
CATTTGAACC ACCACGACGT GACGTTCGTC GCGGTGTCCC GCGCGCCGAT GGACAAGATC
GCCACCTACA AAAAGCGCAT GGGCTGGCGA TTCCCGTGGG TGTCGTCGTT CGGCTCGACG
TTCAATCACG ACTATCGCGT GAGTTTCTCG CAGGACGAAC TCGCAAGCGG GACGGTCGAC
TACAACTACA CGGCTACGCC ACGCGAAGAG GCTCACGACG AACTGCCTGG AATGAGCGCC
TTTTATCAAG ACGAGGCGCG CAATGTCTTC CACACGTACT CGACGTATGC GCGCGGCTTG
GAGGACATGG TTGGCACGCT GCTGCTGCTC GATCGCGCGC CGCTTGGCCG CAATGAAAAC
GGCCCGATGT CATGGGTGCG CCGTCACGAC GAATATGAAG ACGCGCCGAA CACGCACGGC
TGCAGCGCGA CGTAA
|
|---|
| Protein sequence | MQAHPVVSRD EWLIQRRALL AREKEAIHLR DAINAERQAL PWVKVDAAYV FESPEGKKTL
LDLFDGRSQL MVYHFMLGPD WDAGCPGCSF LSDHIGGMLP HLNHHDVTFV AVSRAPMDKI
ATYKKRMGWR FPWVSSFGST FNHDYRVSFS QDELASGTVD YNYTATPREE AHDELPGMSA
FYQDEARNVF HTYSTYARGL EDMVGTLLLL DRAPLGRNEN GPMSWVRRHD EYEDAPNTHG
CSAT
|
|---|
| |