| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1042 |
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| Symbol | |
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| ID | 8018677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1093338 |
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| End bp | 1094864 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829817 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_002981007 |
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| Protein GI | 241662647 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.861303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.109435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGACG TGGCCATACT GAGCATCATT CGACGCTGGC ATCTTCGCGA CCAGATCCCG
CTGCGCGAGA TCGCCAGACG CCTGGGCATC TCCAGGAACA CCGTCAGACG CTATTTGCGC
GCTGACACCG CCGCACCGGC CTATCCTGCA CGGCAGAGCC CGAGCAAGCT TGGCGGCCAT
GCCGCCAAGC TCTCCGCTTG GCTCAAGACC GAGGCCAACA AGCCACGCAA GCAACGGCGC
ACACTCAAGC AGATCCACAC TGATCTGTGT GCCTTGGGCT TCACCGGCTC CTACGATCGC
GTTGCCGCAT TCGCTCGCCG CTGGCGCCAG GAGCAACAGG AGCAAGCCCG CACGTCGGGG
CGCGGCACCT TTATCCCGCT GCGCTTCGCA GAAGGTGAGG CCTTCCAGTT CGACTGGAGC
GAGGACTGGG CGATCATCGC CGGCGAGCGT ACCAAGCTGC AGGTGGCCCA GTTCAAGCTC
AGCCACAGCC GCGCCTTCTT CCTGCGCGCG TATCTGCTGC AGACCCACGA GATGCTGTTC
GATGCCCATC ACCACGCCTT TGTGGCCTGG GGCGGCATCC CGCGTCGCGG CATCTACGAC
AACATGAAGA CCGCCGTGGA TCGCGTGCGC CAAGGCAAGC TGCGCGACGT CAACCTGCGC
TTCAGCACCA TGGTCAGCCA CTACCTGTTC GACGCCGAGT TCTGCAACCC GGCCTCCGGC
TGGGAGAAGG GGCAGATAGA GAAGAACGTG CAGGACAGCC GTCACCGCAT CTGGCAGCGC
ATCCCTGCAT TCGGCTCTCT CGCCGCGCTC AATGACTGGC TGGCCGACCA GTGCGTACGT
CTGTGGCAGC AGACCCGCCA TCCGGAACTG GACATGACCC TCTGGGAGGC CTGGTCGCTG
GAGCGGCCAC ACCTGATGCC GGTGGGGCAG CCGTTCGATG GCTTTGTCGA GCACACCAAG
CGCGTTTCAC CGACCTGCCT GGTGACCTTC GAGCGCAACC GCTACAGCGT GCCGGCGTCG
TTTGCCAACC GGCCCATCAG TCTGCGCGTC TATGCCGACC GGCTCGTGTT CGTGGCCGAA
GGCCAGGTGA TTGCCGAGCA CGTGCGGCAC ATCGACCGTA GCCATCTTCC GGGACGCACA
ATCTATGACT GGCACCACTA CCTCGCGGTG CTGCAGCGCA AGCCCGGTGC GCTGCGTAAC
GGCGCACCGT TCGCCGAACT GCCCGAGGGC TTCCGGCGTC TGCAGTCCAC ACTGCTCAAG
CGACCCGGCG GCGATCGCGA GATGGTCGAG ATCCTGGCGC TGGTGCTGCT GCACGACGAA
CAGGCCGTGC TGACGGCGGT GGAACTCGCA CTGGAGGCTG GTGCACCGTC CAAACAAACC
ATCCTGAACA TCCTCAGCCG CCTCCTGGAA GGCGAGCCCG TGGCACCGAT CACCTCACCG
CAAGCACTGG CGCTGCACGT CGAACCGCAG GCCAACGTCG GCCGCTACGA CAGCCTGCGA
GATCGGGAGG TGCATCATGC AGCATGA
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| Protein sequence | MIDVAILSII RRWHLRDQIP LREIARRLGI SRNTVRRYLR ADTAAPAYPA RQSPSKLGGH
AAKLSAWLKT EANKPRKQRR TLKQIHTDLC ALGFTGSYDR VAAFARRWRQ EQQEQARTSG
RGTFIPLRFA EGEAFQFDWS EDWAIIAGER TKLQVAQFKL SHSRAFFLRA YLLQTHEMLF
DAHHHAFVAW GGIPRRGIYD NMKTAVDRVR QGKLRDVNLR FSTMVSHYLF DAEFCNPASG
WEKGQIEKNV QDSRHRIWQR IPAFGSLAAL NDWLADQCVR LWQQTRHPEL DMTLWEAWSL
ERPHLMPVGQ PFDGFVEHTK RVSPTCLVTF ERNRYSVPAS FANRPISLRV YADRLVFVAE
GQVIAEHVRH IDRSHLPGRT IYDWHHYLAV LQRKPGALRN GAPFAELPEG FRRLQSTLLK
RPGGDREMVE ILALVLLHDE QAVLTAVELA LEAGAPSKQT ILNILSRLLE GEPVAPITSP
QALALHVEPQ ANVGRYDSLR DREVHHAA
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